CAZyme3D

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Entry ID

Information for CAZyme ID: BBM01209.1

Basic Information

GenBank ID	BBM01209.1
Family	GT2
Sequence Length	246
UniProt ID	A0A510IR38(100,100)
Average pLDDT?	89.38
CAZy50 ID	5050
CAZy50 Rep	No, AZV30663.1
Structure Cluster	-
EC Number(s)	-
Substrates(s)	-

Taxonomy

Tax ID	2591606
Kingdom	Bacteria
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Cellvibrionales
Family	Microbulbiferaceae
Genus	Microbulbifer
Species	Microbulbifer sp. GL-2

PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A510IR38.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50; Download help

MSNFCFVIPV YNHEGAIAET LASLDDFNLP YILVDDGCDE PCRIELQRLE QSYGPRVHLV	60
VRQANGGKGA AVKSGLRAAK EIGYSHGIQV DADGQHSPAD IPQFFEKSRK CPNSLICGYP	120
QYDKSVPKVR LWGRYLTHVW IWINTLSLEI KDSMCGLRCY PLSRTVDLLD NEYTGDRMDF	180
DPEILVRWYW SKGGLCQVPV NVSYPIDGVS HFRGFEDNFL ISAMHTRLFF GMLARTLRIS	240
TAGRRA	246

Predicted 3D structure by AlphaFold2 with pLDDT = 89.38 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM; Download structure help

dbCAN3 predicted domain(s) : GT2(5-125)

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.