CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: BBJ39439.1

Basic Information

GenBank IDBBJ39439.1
FamilyGH18
Sequence Length425
UniProt IDA0A499UR72(100,100)Download
Average pLDDT?89.88
CAZy50 ID28136
CAZy50 RepNo, DAA01336.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID68175
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces antimycoticus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLRPGRLSAA  LAALCTAVLT  ATLLAGSATA  GEPQSAGIAK  ATPKAAPKAA  EAPATKAAGD60
KVVGYFTEWG  IYQRNYHVKN  VETSGSAAKL  THINYAFGNV  TGGKCAIGDA  YADYDKAYDA120
ASSVDGQADT  WDAGALRGNF  NQLRKLKKLH  PGLKVLWSFG  GWTWSSGFTE  AAKNPAAFAQ180
SCYDLVEDPR  WADVFDGIDI  DWEYPNACGL  SCDTSGKDAF  KNLMAAMRAK  FGSSNLVTAA240
ITADASSGGK  IEAADYAGAA  QYVDWYNPMT  YDFFGAWAAQ  GPTAPHSPLN  SYNGIPQQGF300
DTDAAISKLK  GAGIPASKLL  LGIGFYGRGW  SGVTQDAPGG  TATGAAPGTY  EAGIEDYKVL360
KNSCPATGTV  AGTAYAHCGN  QWWSYDTPAT  IAGKMNYKQQ  QGLGGTFFWE  LSGDTTNGEL420
IKSIS425

Predicted 3D structure by AlphaFold2 with pLDDT = 89.88 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(61-420)

MLRPGRLSAA  LAALCTAVLT  ATLLAGSATA  GEPQSAGIAK  ATPKAAPKAA  EAPATKAAGD60
KVVGYFTEWG  IYQRNYHVKN  VETSGSAAKL  THINYAFGNV  TGGKCAIGDA  YADYDKAYDA120
ASSVDGQADT  WDAGALRGNF  NQLRKLKKLH  PGLKVLWSFG  GWTWSSGFTE  AAKNPAAFAQ180
SCYDLVEDPR  WADVFDGIDI  DWEYPNACGL  SCDTSGKDAF  KNLMAAMRAK  FGSSNLVTAA240
ITADASSGGK  IEAADYAGAA  QYVDWYNPMT  YDFFGAWAAQ  GPTAPHSPLN  SYNGIPQQGF300
DTDAAISKLK  GAGIPASKLL  LGIGFYGRGW  SGVTQDAPGG  TATGAAPGTY  EAGIEDYKVL360
KNSCPATGTV  AGTAYAHCGN  QWWSYDTPAT  IAGKMNYKQQ  QGLGGTFFWE  LSGDTTNGEL420
IKSIS425

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help