CAZyme3D

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Entry ID

Information for CAZyme ID: BBI94356.1

Basic Information

GenBank IDBBI94356.1
FamilyCBM34, GH13_21
Sequence Length605
UniProt IDA0A455VU66(100,100)Download
Average pLDDT?93.33
CAZy50 ID45846
CAZy50 RepNo, AMO50316.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID61645
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter asburiae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLNAWHLPVA  PFVKQNKDNL  VITLWLAGEN  QPERVTLRAE  IDNEETGLKM  HRLRSQPQPG60
ITAWRANIDL  NTGQPRRRYS  FKLLWNNRQL  WFTPQGFSRF  PPARLEQFAV  DYPDNGPQWV120
NDQVFYQIFP  DRFARSEKRT  ADQDKIYHHH  AAGHDIILKA  WDEPLTAQAG  GSTFYGGDLD180
GISEKLPYLK  KLGVTALYLN  PVFKAPSVHK  YDTEDYRHVD  AQFGGDEALL  RLRKNTQNEG240
MRLILDGVFN  HSGDSHAWFD  RHNQSMGGAC  HNPDSPQRDW  YSFNEEGRAL  DWLGYASLPK300
LDFQSSTLVN  EIYGGEDSIV  RHWLKAPWNM  DGWRLDVVHM  LGEAGGARNN  LQHVAGITRS360
AKAAQPEAFV  FGEHFGDARQ  WLQNDAEDAA  MNYRGFTFPL  WGFLANTDIS  YDPNHIDAET420
CMAWMENYRA  GLSHQQQLRM  FNQLDSHDTA  RFKSLLGKDV  ARLPLAVTWL  FTWPGVPCIY480
YGDEVGLDGN  NDPFCRKTFP  WEPAKQDKVL  FSLYQRLAKL  RKQSLALRYG  GCQVVYAHDN540
VVVFARVYNQ  QRVLVAINRG  EACEVVLDDS  PLLKVAMWKN  KEGKATIQDG  VLALPAVSAT600
IWFGS605

Predicted 3D structure by AlphaFold2 with pLDDT = 93.33 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM34(5-116)+GH13_21(177-491)

MLNAWHLPVA  PFVKQNKDNL  VITLWLAGEN  QPERVTLRAE  IDNEETGLKM  HRLRSQPQPG60
ITAWRANIDL  NTGQPRRRYS  FKLLWNNRQL  WFTPQGFSRF  PPARLEQFAV  DYPDNGPQWV120
NDQVFYQIFP  DRFARSEKRT  ADQDKIYHHH  AAGHDIILKA  WDEPLTAQAG  GSTFYGGDLD180
GISEKLPYLK  KLGVTALYLN  PVFKAPSVHK  YDTEDYRHVD  AQFGGDEALL  RLRKNTQNEG240
MRLILDGVFN  HSGDSHAWFD  RHNQSMGGAC  HNPDSPQRDW  YSFNEEGRAL  DWLGYASLPK300
LDFQSSTLVN  EIYGGEDSIV  RHWLKAPWNM  DGWRLDVVHM  LGEAGGARNN  LQHVAGITRS360
AKAAQPEAFV  FGEHFGDARQ  WLQNDAEDAA  MNYRGFTFPL  WGFLANTDIS  YDPNHIDAET420
CMAWMENYRA  GLSHQQQLRM  FNQLDSHDTA  RFKSLLGKDV  ARLPLAVTWL  FTWPGVPCIY480
YGDEVGLDGN  NDPFCRKTFP  WEPAKQDKVL  FSLYQRLAKL  RKQSLALRYG  GCQVVYAHDN540
VVVFARVYNQ  QRVLVAINRG  EACEVVLDDS  PLLKVAMWKN  KEGKATIQDG  VLALPAVSAT600
IWFGS605

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help