CAZyme3D

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Entry ID

Information for CAZyme ID: BBH70690.1

Basic Information

GenBank IDBBH70690.1
FamilyCBM2, GH10
Sequence Length449
UniProt IDA0A3T1B6H5(100,100)Download
Average pLDDT?89.05
CAZy50 ID14267
CAZy50 RepNo, ADG73164.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID946334
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusActinoplanes
SpeciesActinoplanes sp. OR16

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTIPRKGRFA  MLSAAVAGVV  VAASVAVTGS  AEAATTLGAS  AAQTGRYFGA  ATSAFKLSDT60
PYMTILNREF  TSLVPENDMK  WDATEPQQGR  FTYTNGDRLV  SHAQSRGMTV  RGHALLWHAQ120
QPAWAQSLSG  AALRSAAINH  VTQVATHFRG  KIHSWDVVNE  AFADGGSGGR  RDSNLQRTGN180
DWIEAAFRAA  RAADPGARLC  YNDYNTDGIN  AKSTGIYNMV  RDFKARGVPI  DCVGLQSHLG240
TTLDSTYQQN  IQRFADLGVD  VQITELDVQQ  GGNQAGIFAA  VTRACLAVAR  CTGITVWGVR300
DSDSWRTGQN  PLLFDANGNK  KAAYTAVLDA  LNAGGPTTPS  SPPPSSPPPS  PAPGGCTAAL360
TLNSWNGGYT  ATVRVTAGTS  AVSGWSVGVA  VPAGGAVTNT  WNATNTGASG  QVTFRNVGYN420
GQIAAGGSTE  FGFQGTGTGP  AATPACTAA449

Predicted 3D structure by AlphaFold2 with pLDDT = 89.05 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH10(41-330)+CBM2(356-447)

MTIPRKGRFA  MLSAAVAGVV  VAASVAVTGS  AEAATTLGAS  AAQTGRYFGA  ATSAFKLSDT60
PYMTILNREF  TSLVPENDMK  WDATEPQQGR  FTYTNGDRLV  SHAQSRGMTV  RGHALLWHAQ120
QPAWAQSLSG  AALRSAAINH  VTQVATHFRG  KIHSWDVVNE  AFADGGSGGR  RDSNLQRTGN180
DWIEAAFRAA  RAADPGARLC  YNDYNTDGIN  AKSTGIYNMV  RDFKARGVPI  DCVGLQSHLG240
TTLDSTYQQN  IQRFADLGVD  VQITELDVQQ  GGNQAGIFAA  VTRACLAVAR  CTGITVWGVR300
DSDSWRTGQN  PLLFDANGNK  KAAYTAVLDA  LNAGGPTTPS  SPPPSSPPPS  PAPGGCTAAL360
TLNSWNGGYT  ATVRVTAGTS  AVSGWSVGVA  VPAGGAVTNT  WNATNTGASG  QVTFRNVGYN420
GQIAAGGSTE  FGFQGTGTGP  AATPACTAA449

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help