CAZyme3D

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Entry ID

Information for CAZyme ID: BBG94266.1

Basic Information

GenBank IDBBG94266.1
FamilyGT37
Sequence Length522
UniProt IDA0A4Y1QQZ7(100,100)Download
Average pLDDT?82.60
CAZy50 ID4576
CAZy50 RepNo, CAE6064946.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3755
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderRosales
FamilyRosaceae
GenusPrunus
SpeciesPrunus dulcis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSYIGGSFGL  SPVLVTLSLV  LRSPPPDRIK  GFADARVIQR  LTPNDTSSSN  SEDGFSDHTQ60
MPKDTLHDGL  IASGFDEGSC  LSRLRNYEHL  HKKCGPHTKS  YKTAMARLKS  SDQGNSSVGG120
SSECKYVVWI  SYSGLGNKIL  TITSAFLYAL  LTNRVLLVDP  GKDMADLFCE  PFPENSWLLS180
KDFSIKEKFN  KFDQKSPHCY  GNMLKNKKNT  SSEFVPLFLY  LHLAHDYDEQ  DKLFFCDEYQ240
SLTGKVPWLI  MRTDNYFVPS  LFLMPSFEQE  LEKLFPEKET  VFHHLGRYLF  HPSNHVWGLI300
TRYYQAHLAK  ADERIGIQVR  TFESGPSPRQ  HVMNQIYACV  FKEKLLPQVD  KQKPVVTAPS360
GIPKLKSVLI  TSLTSGYSEN  MRNMYWEHPT  VNGDLIGVFQ  PSHEGHQQTD  KNLHDRKAWA420
EMYLLSLCDV  LVTSAWSTFG  YVAQGLGGLK  PWILYKPENQ  TMPNPPCHQV  MSMEPCFHAP480
PFYDCKAKRG  VDTGALVPHV  RHCEDMSWGL  KIVGSHESHD  QL522

Predicted 3D structure by AlphaFold2 with pLDDT = 82.60 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT37(81-487)

MSYIGGSFGL  SPVLVTLSLV  LRSPPPDRIK  GFADARVIQR  LTPNDTSSSN  SEDGFSDHTQ60
MPKDTLHDGL  IASGFDEGSC  LSRLRNYEHL  HKKCGPHTKS  YKTAMARLKS  SDQGNSSVGG120
SSECKYVVWI  SYSGLGNKIL  TITSAFLYAL  LTNRVLLVDP  GKDMADLFCE  PFPENSWLLS180
KDFSIKEKFN  KFDQKSPHCY  GNMLKNKKNT  SSEFVPLFLY  LHLAHDYDEQ  DKLFFCDEYQ240
SLTGKVPWLI  MRTDNYFVPS  LFLMPSFEQE  LEKLFPEKET  VFHHLGRYLF  HPSNHVWGLI300
TRYYQAHLAK  ADERIGIQVR  TFESGPSPRQ  HVMNQIYACV  FKEKLLPQVD  KQKPVVTAPS360
GIPKLKSVLI  TSLTSGYSEN  MRNMYWEHPT  VNGDLIGVFQ  PSHEGHQQTD  KNLHDRKAWA420
EMYLLSLCDV  LVTSAWSTFG  YVAQGLGGLK  PWILYKPENQ  TMPNPPCHQV  MSMEPCFHAP480
PFYDCKAKRG  VDTGALVPHV  RHCEDMSWGL  KIVGSHESHD  QL522

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help