CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: BBF82548.1

Basic Information

GenBank IDBBF82548.1
FamilyPL10_1
Sequence Length431
UniProt IDA0A3G9GCW1(100,100)Download
Average pLDDT?92.31
CAZy50 ID79242
CAZy50 RepNo, AEU36651.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID78587
KingdomBacteria
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusAsticcacaulis
SpeciesAsticcacaulis excentricus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGLISATSLA  VSIAAGPQMV  GAAVIGTNTP  APEVSLNRLG  ELPAAQRAAW  ADYIARSQKQ60
MAFDKATLAA  ELQPGETPPP  PPVAGSGKMV  LNKDAAWYAT  PEARTMADTI  VSFQTPSGGW120
SKNQDRTKPP  RLRGQRFGNN  AETMELNTGS  FDAPHDRFWT  FVGTLDNGAT  WTEMRFLGRV180
QAQAPGKDGD  TYRASILKGI  HYLLMAQYPN  GGWPQNYPLE  GGFHDGITFN  DDAVAQAALL240
LTDIAEGKPD  FAFVPADLRR  KAGEAAARAL  RPILDSQIVV  NGKKTIWPQQ  VDALTLAPIS300
ARNYEMRSLA  SSESTDVLLF  LMRQPKPSAE  VRAAIHAGVE  WLKAHAIYDK  AFTEVSKEEG360
RKLIDKPGAG  PIWSRNYDIQ  TGKPIFGDWD  KSIQDDVNNI  SKGRRNGYSW  YGSGPKKAID420
AYADWVKKYP  K431

Predicted 3D structure by AlphaFold2 with pLDDT = 92.31 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL10_1(114-417)

MGLISATSLA  VSIAAGPQMV  GAAVIGTNTP  APEVSLNRLG  ELPAAQRAAW  ADYIARSQKQ60
MAFDKATLAA  ELQPGETPPP  PPVAGSGKMV  LNKDAAWYAT  PEARTMADTI  VSFQTPSGGW120
SKNQDRTKPP  RLRGQRFGNN  AETMELNTGS  FDAPHDRFWT  FVGTLDNGAT  WTEMRFLGRV180
QAQAPGKDGD  TYRASILKGI  HYLLMAQYPN  GGWPQNYPLE  GGFHDGITFN  DDAVAQAALL240
LTDIAEGKPD  FAFVPADLRR  KAGEAAARAL  RPILDSQIVV  NGKKTIWPQQ  VDALTLAPIS300
ARNYEMRSLA  SSESTDVLLF  LMRQPKPSAE  VRAAIHAGVE  WLKAHAIYDK  AFTEVSKEEG360
RKLIDKPGAG  PIWSRNYDIQ  TGKPIFGDWD  KSIQDDVNNI  SKGRRNGYSW  YGSGPKKAID420
AYADWVKKYP  K431

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help