CAZyme3D

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Entry ID

Information for CAZyme ID: BBF44784.1

Basic Information

GenBank IDBBF44784.1
FamilyCBM34, GH13
Sequence Length704
UniProt IDA0A7U6QL81(100,100)Download
Average pLDDT?94.00
CAZy50 ID34608
CAZy50 RepNo, VCV23525.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2093742
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
Genus
SpeciesLachnospiraceae bacterium KM106-2

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MERDVNFQQV  SKRQMLQMYI  ENTTPILNRK  ALFADGTKFY  RWPNEPACYD  KVTLRFRTAR60
DNVDMVYVVY  GNDRKMMRIF  HSDQLFDYYE  TEIQLTEERI  FYYYEIYLGS  TVSYYNQKGI120
LSEPQHCYDF  IIKPGFKTPD  WAKGAVFYQI  FVDRFFNGDT  SNDVEDREYI  YIGEPTVKVT180
DWNKYPANMG  VREFYGGDLK  GIMKKLDYIQ  SLGVDAIYLN  PIFVSPSNHK  YDIQDYDYVD240
PHYGSIVKDE  GEVLEAWDYN  NQNATKYISR  VTDPANLEAS  NRAFIELVDE  IHKRGMKIIL300
DGVFNHCGSF  NKWLDRERIY  EKQEGYEKGA  YIDENSPYRT  FFKFRDGSWP  YNSKYDGWWG360
HDTLPKLNYE  ESQKLYQYIM  RIARKWVAPP  FNVDGWRLDV  AADLGQSNEY  NHMFWKDFRR420
NVKEANPNAI  ILAEHYGDPS  AWLEGDEWDT  VMNYDAFMEP  ITWFLTGVEK  HSDEFRGDLL480
GHADNFFNSM  RHHMSKFNIQ  SLQVAMNELS  NHDHSRFLTR  TNHRVGRTNI  LGPEAAEQMV540
NKGIMRIAVL  MQMTWPGAPT  IYYGDEAGLC  GWTDPDNRRS  YPWGKEDQQL  IQLHRELIRI600
HKGYDALKTG  SILFLGGSNK  YICYGRFDQK  DKFIVAINSD  IVERYVEINA  WEIGVLDDER660
MVQLIMTTES  GYHVEAVIHH  TENGILKLKL  PPVSSIIIKN  IEKY704

Predicted 3D structure by AlphaFold2 with pLDDT = 94.00 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM34(48-140)+GH13_39(197-576)

MERDVNFQQV  SKRQMLQMYI  ENTTPILNRK  ALFADGTKFY  RWPNEPACYD  KVTLRFRTAR60
DNVDMVYVVY  GNDRKMMRIF  HSDQLFDYYE  TEIQLTEERI  FYYYEIYLGS  TVSYYNQKGI120
LSEPQHCYDF  IIKPGFKTPD  WAKGAVFYQI  FVDRFFNGDT  SNDVEDREYI  YIGEPTVKVT180
DWNKYPANMG  VREFYGGDLK  GIMKKLDYIQ  SLGVDAIYLN  PIFVSPSNHK  YDIQDYDYVD240
PHYGSIVKDE  GEVLEAWDYN  NQNATKYISR  VTDPANLEAS  NRAFIELVDE  IHKRGMKIIL300
DGVFNHCGSF  NKWLDRERIY  EKQEGYEKGA  YIDENSPYRT  FFKFRDGSWP  YNSKYDGWWG360
HDTLPKLNYE  ESQKLYQYIM  RIARKWVAPP  FNVDGWRLDV  AADLGQSNEY  NHMFWKDFRR420
NVKEANPNAI  ILAEHYGDPS  AWLEGDEWDT  VMNYDAFMEP  ITWFLTGVEK  HSDEFRGDLL480
GHADNFFNSM  RHHMSKFNIQ  SLQVAMNELS  NHDHSRFLTR  TNHRVGRTNI  LGPEAAEQMV540
NKGIMRIAVL  MQMTWPGAPT  IYYGDEAGLC  GWTDPDNRRS  YPWGKEDQQL  IQLHRELIRI600
HKGYDALKTG  SILFLGGSNK  YICYGRFDQK  DKFIVAINSD  IVERYVEINA  WEIGVLDDER660
MVQLIMTTES  GYHVEAVIHH  TENGILKLKL  PPVSSIIIKN  IEKY704

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help