Information for CAZyme ID: BBD80712.1
Basic Information
GenBank ID | BBD80712.1 |
Family | GH50 |
Sequence Length | 712 |
UniProt ID | A0A2Z6E7E5(100,100)![]() |
Average pLDDT? | 90.77 |
CAZy50 ID | 33418 |
CAZy50 Rep | No, AIF46763.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2010829 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Xanthomonadales |
Family | Rhodanobacteraceae |
Genus | Aerosticca |
Species | Aerosticca soli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MMTWAVLAWL PMAGGVAQTT MAELHEVVSV PAEAPWQGYG FQPAVAPTLV FRPAPGAPPW | 60 |
SGHGEWRIEL ANRMPWAITL TLQAEGDGGE RLQATVGVPA GPAQTLVLPL RPLSPRDFGM | 120 |
QAGPPMPFES SGRRLLLATT VTGTPLSGAL RAVRVSMPAP QAPQQVWFAQ PRTHPDETAV | 180 |
TEAYRAIVDG FGQYTRGSWP EKIADTPALR AAQVREAATR PPAPAGGDRY GGRPGVVGLT | 240 |
ATGWFHAQKA AGRWWLVTPE GGAFFSLGVD AVDPGEGRSH VQGREWMFRG LPPREGPWRT | 300 |
FYGEDRPAST EIGARAGLAF ASGTWFDFYA ANLYRADGAD GLSAWRARTL ARLAAWGFNT | 360 |
LGAWSEPALG AAHRLAYTRT LTIAGAFGNV ATGQDWWGRM PDPFDPRFAE AAEAAAARAS | 420 |
AGAHDDPWLL GYFLDNELPW AGPGAQGRWA LARGTLAGMP VSHAKRVFIA ELKRRYGSAA | 480 |
RLAVAWGLAI QDWMALEATG FVAPVPEPAH PAIAADYAAW QRRYAETYFD VAVTALRRHD | 540 |
PHHLILGARF ASSTPEAIEA SARRVDVLSF NVYADLPQHG LDRALLQRLD RPLLIGEFHF | 600 |
GSDDRGPFGK GLVPVWNEAG RGEAYARYLS AAAGDPLIVG AHWFAYADQP VSGRLLDGEN | 660 |
SHIGLVGITD LPFTGFVEAV RKANLRALER AAKTCLEAPC PGDTGAPARP AD | 712 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.77 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH50(49-685)
MMTWAVLAWL PMAGGVAQTT MAELHEVVSV PAEAPWQGYG FQPAVAPTLV FRPAPGAPPW | 60 |
SGHGEWRIEL ANRMPWAITL TLQAEGDGGE RLQATVGVPA GPAQTLVLPL RPLSPRDFGM | 120 |
QAGPPMPFES SGRRLLLATT VTGTPLSGAL RAVRVSMPAP QAPQQVWFAQ PRTHPDETAV | 180 |
TEAYRAIVDG FGQYTRGSWP EKIADTPALR AAQVREAATR PPAPAGGDRY GGRPGVVGLT | 240 |
ATGWFHAQKA AGRWWLVTPE GGAFFSLGVD AVDPGEGRSH VQGREWMFRG LPPREGPWRT | 300 |
FYGEDRPAST EIGARAGLAF ASGTWFDFYA ANLYRADGAD GLSAWRARTL ARLAAWGFNT | 360 |
LGAWSEPALG AAHRLAYTRT LTIAGAFGNV ATGQDWWGRM PDPFDPRFAE AAEAAAARAS | 420 |
AGAHDDPWLL GYFLDNELPW AGPGAQGRWA LARGTLAGMP VSHAKRVFIA ELKRRYGSAA | 480 |
RLAVAWGLAI QDWMALEATG FVAPVPEPAH PAIAADYAAW QRRYAETYFD VAVTALRRHD | 540 |
PHHLILGARF ASSTPEAIEA SARRVDVLSF NVYADLPQHG LDRALLQRLD RPLLIGEFHF | 600 |
GSDDRGPFGK GLVPVWNEAG RGEAYARYLS AAAGDPLIVG AHWFAYADQP VSGRLLDGEN | 660 |
SHIGLVGITD LPFTGFVEAV RKANLRALER AAKTCLEAPC PGDTGAPARP AD | 712 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.