CAZyme3D

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Entry ID

Information for CAZyme ID: BBD80712.1

Basic Information

GenBank IDBBD80712.1
FamilyGH50
Sequence Length712
UniProt IDA0A2Z6E7E5(100,100)Download
Average pLDDT?90.77
CAZy50 ID33418
CAZy50 RepNo, AIF46763.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2010829
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderXanthomonadales
FamilyRhodanobacteraceae
GenusAerosticca
SpeciesAerosticca soli

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMTWAVLAWL  PMAGGVAQTT  MAELHEVVSV  PAEAPWQGYG  FQPAVAPTLV  FRPAPGAPPW60
SGHGEWRIEL  ANRMPWAITL  TLQAEGDGGE  RLQATVGVPA  GPAQTLVLPL  RPLSPRDFGM120
QAGPPMPFES  SGRRLLLATT  VTGTPLSGAL  RAVRVSMPAP  QAPQQVWFAQ  PRTHPDETAV180
TEAYRAIVDG  FGQYTRGSWP  EKIADTPALR  AAQVREAATR  PPAPAGGDRY  GGRPGVVGLT240
ATGWFHAQKA  AGRWWLVTPE  GGAFFSLGVD  AVDPGEGRSH  VQGREWMFRG  LPPREGPWRT300
FYGEDRPAST  EIGARAGLAF  ASGTWFDFYA  ANLYRADGAD  GLSAWRARTL  ARLAAWGFNT360
LGAWSEPALG  AAHRLAYTRT  LTIAGAFGNV  ATGQDWWGRM  PDPFDPRFAE  AAEAAAARAS420
AGAHDDPWLL  GYFLDNELPW  AGPGAQGRWA  LARGTLAGMP  VSHAKRVFIA  ELKRRYGSAA480
RLAVAWGLAI  QDWMALEATG  FVAPVPEPAH  PAIAADYAAW  QRRYAETYFD  VAVTALRRHD540
PHHLILGARF  ASSTPEAIEA  SARRVDVLSF  NVYADLPQHG  LDRALLQRLD  RPLLIGEFHF600
GSDDRGPFGK  GLVPVWNEAG  RGEAYARYLS  AAAGDPLIVG  AHWFAYADQP  VSGRLLDGEN660
SHIGLVGITD  LPFTGFVEAV  RKANLRALER  AAKTCLEAPC  PGDTGAPARP  AD712

Predicted 3D structure by AlphaFold2 with pLDDT = 90.77 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH50(49-685)

MMTWAVLAWL  PMAGGVAQTT  MAELHEVVSV  PAEAPWQGYG  FQPAVAPTLV  FRPAPGAPPW60
SGHGEWRIEL  ANRMPWAITL  TLQAEGDGGE  RLQATVGVPA  GPAQTLVLPL  RPLSPRDFGM120
QAGPPMPFES  SGRRLLLATT  VTGTPLSGAL  RAVRVSMPAP  QAPQQVWFAQ  PRTHPDETAV180
TEAYRAIVDG  FGQYTRGSWP  EKIADTPALR  AAQVREAATR  PPAPAGGDRY  GGRPGVVGLT240
ATGWFHAQKA  AGRWWLVTPE  GGAFFSLGVD  AVDPGEGRSH  VQGREWMFRG  LPPREGPWRT300
FYGEDRPAST  EIGARAGLAF  ASGTWFDFYA  ANLYRADGAD  GLSAWRARTL  ARLAAWGFNT360
LGAWSEPALG  AAHRLAYTRT  LTIAGAFGNV  ATGQDWWGRM  PDPFDPRFAE  AAEAAAARAS420
AGAHDDPWLL  GYFLDNELPW  AGPGAQGRWA  LARGTLAGMP  VSHAKRVFIA  ELKRRYGSAA480
RLAVAWGLAI  QDWMALEATG  FVAPVPEPAH  PAIAADYAAW  QRRYAETYFD  VAVTALRRHD540
PHHLILGARF  ASSTPEAIEA  SARRVDVLSF  NVYADLPQHG  LDRALLQRLD  RPLLIGEFHF600
GSDDRGPFGK  GLVPVWNEAG  RGEAYARYLS  AAAGDPLIVG  AHWFAYADQP  VSGRLLDGEN660
SHIGLVGITD  LPFTGFVEAV  RKANLRALER  AAKTCLEAPC  PGDTGAPARP  AD712

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help