Information for CAZyme ID: BBC74467.1
Basic Information
GenBank ID | BBC74467.1 |
Family | GT51 |
Sequence Length | 693 |
UniProt ID | A0A2Z5Z299(100,100)![]() |
Average pLDDT? | 89.91 |
CAZy50 ID | 38913 |
CAZy50 Rep | No, AYF99640.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1359 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Lactobacillales |
Family | Streptococcaceae |
Genus | Lactococcus |
Species | Lactococcus cremoris |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRYSKISTKS KKNKQNKWAK SGSAKSKWWT AVKLFLIVFF SLIILGLAAG GAVFVYYAKD | 60 |
APALNLDKLE STPSPKVYDS KEHLVATLGA EQRNLVKTDN IPVMLVNAVT SIEDHRFFNT | 120 |
RGIDPIRIAG AFVNNLKGGS LNGGSTLDMQ LIKLSFFSTD ESDQTLSVKV QEAWMALKLD | 180 |
QKWTKEQIFT AYVNKVNMAN GYYGMGTAAQ AYYGKDLTEL SIAQLALLAG MPQAPNTYNP | 240 |
YTNATSAKWR RDMVIRSMRR YNKITAEEEK TALATPIDDG LQPLQQSVTI PSYADNFLKQ | 300 |
AIAQAKTLAG NDILNEGVKI YTILDTTAQQ NLYNIVNSGN YITYPDDTLQ VASTVTDVKT | 360 |
GAVIAQIGGR NQPTDVTFGF NQAVQTDRDW GSTMKPIVDY GPAFENNIYT STNDYVSDSP | 420 |
TTYPNGTPLK NWDNTYFGSM TVKSALALSR NIPAVKTLIN VGLDNSSKFV DGLGINLNPL | 480 |
QYSNAISSNT DTKNGGASSE RMAAAYAAFS NGGIYTKPYY VSKVVFPDGR TVEYKPVRSR | 540 |
AMQASTAYIM TNILQSVLTL SLSESVGSYA AVPGLPAAGK TGTSNYTDSE MDQITEKYGS | 600 |
LPGMISPDEN FVGYTPQYSM AVWTGYSNRM TPIYGTSTQI ATKVFSSMMT QLNPDPSAVA | 660 |
TWTAPEGVAQ QGSALVKTDS SGQTVTQSSA NGG | 693 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(83-258)
MRYSKISTKS KKNKQNKWAK SGSAKSKWWT AVKLFLIVFF SLIILGLAAG GAVFVYYAKD | 60 |
APALNLDKLE STPSPKVYDS KEHLVATLGA EQRNLVKTDN IPVMLVNAVT SIEDHRFFNT | 120 |
RGIDPIRIAG AFVNNLKGGS LNGGSTLDMQ LIKLSFFSTD ESDQTLSVKV QEAWMALKLD | 180 |
QKWTKEQIFT AYVNKVNMAN GYYGMGTAAQ AYYGKDLTEL SIAQLALLAG MPQAPNTYNP | 240 |
YTNATSAKWR RDMVIRSMRR YNKITAEEEK TALATPIDDG LQPLQQSVTI PSYADNFLKQ | 300 |
AIAQAKTLAG NDILNEGVKI YTILDTTAQQ NLYNIVNSGN YITYPDDTLQ VASTVTDVKT | 360 |
GAVIAQIGGR NQPTDVTFGF NQAVQTDRDW GSTMKPIVDY GPAFENNIYT STNDYVSDSP | 420 |
TTYPNGTPLK NWDNTYFGSM TVKSALALSR NIPAVKTLIN VGLDNSSKFV DGLGINLNPL | 480 |
QYSNAISSNT DTKNGGASSE RMAAAYAAFS NGGIYTKPYY VSKVVFPDGR TVEYKPVRSR | 540 |
AMQASTAYIM TNILQSVLTL SLSESVGSYA AVPGLPAAGK TGTSNYTDSE MDQITEKYGS | 600 |
LPGMISPDEN FVGYTPQYSM AVWTGYSNRM TPIYGTSTQI ATKVFSSMMT QLNPDPSAVA | 660 |
TWTAPEGVAQ QGSALVKTDS SGQTVTQSSA NGG | 693 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.