CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: BBC60576.1

Basic Information

GenBank IDBBC60576.1
FamilyGH126
Sequence Length388
UniProt IDA0A2Z5Y190(100,100)Download
Average pLDDT?89.09
CAZy50 ID97522
CAZy50 RepNo, QUE59918.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID33970
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusMelissococcus
SpeciesMelissococcus plutonius

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKLKKIGIIF  GCLLLLGVGI  IFLKNLGEKK  ETIKVDQKIQ  KIMTTNIHTY  SPKNNFQTPI60
IKERREQLLS  FIHKRLLTEK  GITTNYLDGP  KQKEFATGHE  LLSESASLYL  THLAFSKNQQ120
AYDDFYKKTI  HTFYDKGQFS  YRVSEKGKKY  AINASIDDLR  IIRSLIQAQV  AFNDDNYGKT180
ASKLGKTFIK  NSTNDYIIVD  FYDTSMKQKS  SVTSLFYVDL  LTLGLLYQKL  NIPATYLQQQ240
YELVKDGYIS  DTFPFYKANY  DHKAKQYSQT  NINIIESLLT  IFHLSEVGLQ  KQTSIDFVKQ300
QVHKGTLFNS  YDEDGIPVDK  SQSAASYALA  ALIGSTVGDK  ELYDQAILVL  NNFQVSDKDS360
HLYGGFGDQR  TNKVYSYDNL  MALLAYDV388

Predicted 3D structure by AlphaFold2 with pLDDT = 89.09 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH126(68-386)

MKLKKIGIIF  GCLLLLGVGI  IFLKNLGEKK  ETIKVDQKIQ  KIMTTNIHTY  SPKNNFQTPI60
IKERREQLLS  FIHKRLLTEK  GITTNYLDGP  KQKEFATGHE  LLSESASLYL  THLAFSKNQQ120
AYDDFYKKTI  HTFYDKGQFS  YRVSEKGKKY  AINASIDDLR  IIRSLIQAQV  AFNDDNYGKT180
ASKLGKTFIK  NSTNDYIIVD  FYDTSMKQKS  SVTSLFYVDL  LTLGLLYQKL  NIPATYLQQQ240
YELVKDGYIS  DTFPFYKANY  DHKAKQYSQT  NINIIESLLT  IFHLSEVGLQ  KQTSIDFVKQ300
QVHKGTLFNS  YDEDGIPVDK  SQSAASYALA  ALIGSTVGDK  ELYDQAILVL  NNFQVSDKDS360
HLYGGFGDQR  TNKVYSYDNL  MALLAYDV388

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help