Information for CAZyme ID: BAY54884.1
Basic Information
| GenBank ID | BAY54884.1 |
| Family | CBM48, GH13_9 |
| Sequence Length | 762 |
| UniProt ID | A0A1Z4JDL3(100,100) |
| Average pLDDT? | 94.39 |
| CAZy50 ID | 24109 |
| CAZy50 Rep | No, APR88210.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1973484 |
| Kingdom | Bacteria |
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | Leptolyngbya |
| Species | Leptolyngbya boryana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSMTIAPDQV ERIVWNQHHD PFEVLGPHAI EQDGKTVWVV RAYQPNADSV SVILPESRTE | 60 |
| YPMQSLHHPH FFECTIDVPE LVNYQLRLKS SEHDRVIYDP YAFRSPFLTE FDLHLFTEGN | 120 |
| HHRIYEKLGA HLTTQNGIAG VYFAVWAPNA RNVSVLGDFN NWDGRQHQMR RGSTGVWELF | 180 |
| IPELTVGAHY KYEIKNQNGH IYEKSDPHGF QQEVRPKTAS IVTDLDDYTW HDEDWLEKRR | 240 |
| HTDPLTNPIS VYEVHLGSWL HASSAEPALL PNGESSPPVI VTDLKPGARF LTYRELADKL | 300 |
| IPYVKELGFT HIELLPIAEH PFDGSWGYQV VGHYACTSRF GTPQDFMYFV DQCHLNGIGV | 360 |
| IVDWVPGHFP KDGHGLAFFD GTHLYEHADP RKGEHKEWGT LVFNYGRNEV RNYLVANALF | 420 |
| WFDKYHIDGV RVDAVASMLY LDYCRKDGEW VANQYGGREN IEAADFLRQM NHLLFSYFPG | 480 |
| ALSIAEESTS WPMVSWPTYV GGLGFNLKWN MGWMHDMLDY FHMDPWFRQF HQNNLTFSIW | 540 |
| YHHSENFMLA LSHDEVVHGK SNMIGKMPGD EWQKFANLRC LYGYMFAHPG KKTLFMSMEF | 600 |
| AQWNEWNVWG DLDWHLLQYE PHRKLKQFFT VLNSLYRSEP SLYAQDFSEA GFEWIDCSDN | 660 |
| RHSVISFIRR DKDSGDFIVA VCNFTPQPHS HYRVGVPEAG FYTELLNSDA RDFGGSNMGN | 720 |
| LGGKWSDEWA YHNHPYSIDL CLPPLSTLIL KLDRQKSRTL SS | 762 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.39 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(25-104)+CBM48(127-208)+GH13_9(302-602)
| MSMTIAPDQV ERIVWNQHHD PFEVLGPHAI EQDGKTVWVV RAYQPNADSV SVILPESRTE | 60 |
| YPMQSLHHPH FFECTIDVPE LVNYQLRLKS SEHDRVIYDP YAFRSPFLTE FDLHLFTEGN | 120 |
| HHRIYEKLGA HLTTQNGIAG VYFAVWAPNA RNVSVLGDFN NWDGRQHQMR RGSTGVWELF | 180 |
| IPELTVGAHY KYEIKNQNGH IYEKSDPHGF QQEVRPKTAS IVTDLDDYTW HDEDWLEKRR | 240 |
| HTDPLTNPIS VYEVHLGSWL HASSAEPALL PNGESSPPVI VTDLKPGARF LTYRELADKL | 300 |
| IPYVKELGFT HIELLPIAEH PFDGSWGYQV VGHYACTSRF GTPQDFMYFV DQCHLNGIGV | 360 |
| IVDWVPGHFP KDGHGLAFFD GTHLYEHADP RKGEHKEWGT LVFNYGRNEV RNYLVANALF | 420 |
| WFDKYHIDGV RVDAVASMLY LDYCRKDGEW VANQYGGREN IEAADFLRQM NHLLFSYFPG | 480 |
| ALSIAEESTS WPMVSWPTYV GGLGFNLKWN MGWMHDMLDY FHMDPWFRQF HQNNLTFSIW | 540 |
| YHHSENFMLA LSHDEVVHGK SNMIGKMPGD EWQKFANLRC LYGYMFAHPG KKTLFMSMEF | 600 |
| AQWNEWNVWG DLDWHLLQYE PHRKLKQFFT VLNSLYRSEP SLYAQDFSEA GFEWIDCSDN | 660 |
| RHSVISFIRR DKDSGDFIVA VCNFTPQPHS HYRVGVPEAG FYTELLNSDA RDFGGSNMGN | 720 |
| LGGKWSDEWA YHNHPYSIDL CLPPLSTLIL KLDRQKSRTL SS | 762 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.