CAZyme3D

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Entry ID

Information for CAZyme ID: BAY49063.1

Basic Information

GenBank IDBAY49063.1
FamilyGH2
Sequence Length636
UniProt IDA0A1Z4J492(100,100)Download
Average pLDDT?89.52
CAZy50 ID45843
CAZy50 RepNo, QYO62738.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1137095
KingdomBacteria
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyScytonemataceae
GenusScytonema
SpeciesScytonema sp. HK-05
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A1Z4J492.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNLLELNNHA  VELTSNADKK  MSLSLKETAY  PRPQFQRISS  GDAERTNWQS  LNGLWKFAFD60
DQGTCVQPSD  VKQWSHDIEV  PFAPESAKSG  IGDTGFHPNC  WYEREFETPP  GEGRLLLHFG120
AVDYRARVWV  NDLYIAEHEG  GHTAFTLDIT  HVLNDSGTTK  VTVWAQDDPQ  DLAKPRGKQD180
WQLEPHGIWY  PRTSGIWQTV  WVERVGTSYI  DHIRWTPDFE  RWEIGCYAAL  AGNVPASGVQ240
IKVKLSVGDR  EAGAEHHRVL  VNDAYEVFNG  EISRRLALSD  PGIDDYRNEL  LWSPEKPTLI300
NADIELWYKD  ELLDKVKTYT  AMRTVSIQRD  RFMLNGRPYY  LRLVLDQGYW  ADSLMTAPDD360
DALRRDVELA  KAMGFNGVRK  HQKIEDPRFL  YWADVLGLLV  WEEMPSAYRF  SPKAVERMTK420
EWTEVIKRDV  NHPCIVAWVP  FNESWGVPNL  VETKAHQNYV  LAMYHLTKTL  DPTRPVIGND480
GWESTDTDIL  AIHDYDTNPL  HLAHRYGAEV  KLSDLFDRKR  PGGRILTLDN  YPHQGQPVML540
TEFGGIAYAP  EDKPDSNKIW  GYERSWNISE  LQMKYAALLE  TINNIEIFSG  FCYTQLTDTF600
QEANGLLYAD  RTPKFPIEAI  RAATLSGEGL  CTPTHC636

Predicted 3D structure by AlphaFold2 with pLDDT = 89.52 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH2(40-498)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help