CAZyme3D

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Entry ID

Information for CAZyme ID: BAX81105.1

Basic Information

GenBank IDBAX81105.1
FamilyGH150
Sequence Length882
UniProt IDA0A1Y1CL87(100,100)Download
Average pLDDT?93.75
CAZy50 ID19316
CAZy50 RepNo, ANW96222.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1717717
KingdomBacteria
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusLabilibaculum
SpeciesLabilibaculum antarcticum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIKYVSTLLL  LFLVSFSHAE  NFTIEGNSIQ  NIVNAKVKGE  NVYYISELDG  SVSCYDTSGE60
KIWRNPTQSP  AVLFEIEAAD  INNDGNDDLL  VASGDGHIYC  WGSNGKLLWK  FKPEHRVRFS120
EIAVLKDSNK  PRIYAGGNDY  QLYELSAKGK  LLSKTKIEGV  VRKIEIGDFL  EEDRNTIFVM180
TYAHDKYRWD  FMGFIDPDSK  QVLSSLDYKK  NKVKIWSKFM  VNDLSVADID  GDNRDDLLFF240
GHANSAVFKA  WNGEFKEIVS  FVGKAKDKQR  YAHAIGTSLL  PNKNQIVMQY  GGISYLLNSK300
GEMLQTWGER  HVGIIFNDLL  YQADTDELIC  AGQVGGGNGI  YTYSLQKKNW  WKSKQQLQGR360
MTEVNGNLNK  LYQQTLNFTP  PVYQKPSSKE  WLMITRAQMN  AEVENLNGAE  IKIIEQYSWK420
ENTDRSDLVA  KIGKDAIKKD  RRGKYNLTRE  EIVNMAKEKE  ANNIPFAVWA  GHGNDPFYLR480
IETLEAILEV  APNTCYGFVY  AEMDNTKDPR  VHHFINEYVP  RLAKACRKNG  KAKLYFRYKN540
MFWAASSHQE  PWKGLFFSGK  YNDILVPASE  DTSSRTQDIN  FVGRVGMFAG  NYVDDFCMRL600
VDDNPTSWRP  LTPGGQRSVS  PYLRTGVMLA  AYGARTGLLF  NNQYLEKPGL  NILYALMKSG660
ALPIVEREDI  LSIGSWHLIK  DVDEKLVHSV  DDHHNLLQYS  EEDENAVVSL  AQMHWAGTSL720
PDHDFSKLAL  GVEYRWMNYM  PKMPHGMVPM  APIEMQAKFK  KEKIPYFVSD  CKVGYDGSTK780
IEAKQFGPVI  KEVVEVGEEK  MLIAVKGASW  SVVRLDKNHV  RVILVDPGYI  DPQDREVEIN840
FQHRKPVKVN  DILSKEDLEV  KNEKCKVIVP  AGSIRLIDVT  YK882

Predicted 3D structure by AlphaFold2 with pLDDT = 93.75 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH150(22-880)

MIKYVSTLLL  LFLVSFSHAE  NFTIEGNSIQ  NIVNAKVKGE  NVYYISELDG  SVSCYDTSGE60
KIWRNPTQSP  AVLFEIEAAD  INNDGNDDLL  VASGDGHIYC  WGSNGKLLWK  FKPEHRVRFS120
EIAVLKDSNK  PRIYAGGNDY  QLYELSAKGK  LLSKTKIEGV  VRKIEIGDFL  EEDRNTIFVM180
TYAHDKYRWD  FMGFIDPDSK  QVLSSLDYKK  NKVKIWSKFM  VNDLSVADID  GDNRDDLLFF240
GHANSAVFKA  WNGEFKEIVS  FVGKAKDKQR  YAHAIGTSLL  PNKNQIVMQY  GGISYLLNSK300
GEMLQTWGER  HVGIIFNDLL  YQADTDELIC  AGQVGGGNGI  YTYSLQKKNW  WKSKQQLQGR360
MTEVNGNLNK  LYQQTLNFTP  PVYQKPSSKE  WLMITRAQMN  AEVENLNGAE  IKIIEQYSWK420
ENTDRSDLVA  KIGKDAIKKD  RRGKYNLTRE  EIVNMAKEKE  ANNIPFAVWA  GHGNDPFYLR480
IETLEAILEV  APNTCYGFVY  AEMDNTKDPR  VHHFINEYVP  RLAKACRKNG  KAKLYFRYKN540
MFWAASSHQE  PWKGLFFSGK  YNDILVPASE  DTSSRTQDIN  FVGRVGMFAG  NYVDDFCMRL600
VDDNPTSWRP  LTPGGQRSVS  PYLRTGVMLA  AYGARTGLLF  NNQYLEKPGL  NILYALMKSG660
ALPIVEREDI  LSIGSWHLIK  DVDEKLVHSV  DDHHNLLQYS  EEDENAVVSL  AQMHWAGTSL720
PDHDFSKLAL  GVEYRWMNYM  PKMPHGMVPM  APIEMQAKFK  KEKIPYFVSD  CKVGYDGSTK780
IEAKQFGPVI  KEVVEVGEEK  MLIAVKGASW  SVVRLDKNHV  RVILVDPGYI  DPQDREVEIN840
FQHRKPVKVN  DILSKEDLEV  KNEKCKVIVP  AGSIRLIDVT  YK882

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help