Information for CAZyme ID: BAV79901.1
Basic Information
GenBank ID | BAV79901.1 |
Family | CBM34, GH13_20 |
Sequence Length | 579 |
UniProt ID | A0A1E1GAK0(100,100)![]() |
Average pLDDT? | 96.31 |
CAZy50 ID | 50542 |
CAZy50 Rep | No, AJO16879.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1902136 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Lactobacillales |
Family | Streptococcaceae |
Genus | Streptococcus |
Species | Streptococcus sp. NPS 308 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MELTAIYHRP ESEYAYLYKE KIMHIRIRTK KDDIESIHLH YGDTFIFLED HYEASKAMVK | 60 |
VTSDALFDYW QVEVTVGYAR LQYLFELKDK QGQSIFYGDK GCVENTLENL HYEGNGFKIP | 120 |
YIHEIDACHV PDWVAKTVWY QIFPERFANG NPEISPEGAL AWDSSIKPKT SDFFGGDLQG | 180 |
IIDHLDYLQD LGVTGLYLCP IFESPSNHKY NTTDYFEIDH HFGDKETFRK LVEEAHQRDM | 240 |
KIMLDAVFNH IGDQSPQWQD VLKHGEKSEY KDWFHVQEFP VSKNKLGNPR KLPYHTFAFA | 300 |
SYMPKLNTAN PQVRDYLLKV ATYWIEELGI DAWRLDVANE VDHQFWRDFR KAVLAKKPDL | 360 |
YILGEVWHTS QPWLNGDEFH AVMNYPLSDS IKDYFLRGTK KTPQFINEIN SQSMYYRQQI | 420 |
SEVMFNLLDS HDTERILATA KGDAQLVKSA LACLFLQRGT PCFYYGTELE LDGGPDPDCR | 480 |
RVMPWERVSD SNEMLNFMKK LIQLRKEVSG IIQHGTYSLK EIKPDVLALE WDYDGQKVQA | 540 |
IFNQSSENYL VDRDSVVLAS HCQELGLQLA ILPKGFIIR | 579 |
Predicted 3D structure by AlphaFold2 with pLDDT = 96.31 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM34(6-126)+GH13_20(176-477)
MELTAIYHRP ESEYAYLYKE KIMHIRIRTK KDDIESIHLH YGDTFIFLED HYEASKAMVK | 60 |
VTSDALFDYW QVEVTVGYAR LQYLFELKDK QGQSIFYGDK GCVENTLENL HYEGNGFKIP | 120 |
YIHEIDACHV PDWVAKTVWY QIFPERFANG NPEISPEGAL AWDSSIKPKT SDFFGGDLQG | 180 |
IIDHLDYLQD LGVTGLYLCP IFESPSNHKY NTTDYFEIDH HFGDKETFRK LVEEAHQRDM | 240 |
KIMLDAVFNH IGDQSPQWQD VLKHGEKSEY KDWFHVQEFP VSKNKLGNPR KLPYHTFAFA | 300 |
SYMPKLNTAN PQVRDYLLKV ATYWIEELGI DAWRLDVANE VDHQFWRDFR KAVLAKKPDL | 360 |
YILGEVWHTS QPWLNGDEFH AVMNYPLSDS IKDYFLRGTK KTPQFINEIN SQSMYYRQQI | 420 |
SEVMFNLLDS HDTERILATA KGDAQLVKSA LACLFLQRGT PCFYYGTELE LDGGPDPDCR | 480 |
RVMPWERVSD SNEMLNFMKK LIQLRKEVSG IIQHGTYSLK EIKPDVLALE WDYDGQKVQA | 540 |
IFNQSSENYL VDRDSVVLAS HCQELGLQLA ILPKGFIIR | 579 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.