CAZyme3D

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Entry ID

Information for CAZyme ID: BAV13142.1

Basic Information

GenBank IDBAV13142.1
FamilyCE2
Sequence Length405
UniProt IDA0A173N0B2(100,100)Download
Average pLDDT?84.27
CAZy50 ID59778
CAZy50 RepNo, WFR58832.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1493
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium cellulovorans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKRGTFLLA  ISIAMLTITP  TVDASAAGSV  KVNLFDENRI  ESINNSYPSL  NEFNCYNVSD60
IRSDNLTEKK  STSKTLLIGR  FDTSDAAGPK  FAWSNTTIKA  NFVGTGISVN  LKSTGDNWFN120
VIVDGVVQTP  INVTSTTSSP  IALVSGLEKG  KHTIELVKRT  EAFVGDVQFL  GFSVSDGKLL180
NPPKPSSKRI  LFIGDSITCG  YGNEGTDPNK  SFTTKNENAS  LAYGALTAKL  LGADPMTICW240
SGKGVLRNYG  GDPKDVMPEI  YNQVLPYNKN  LTWNPKNWVP  QVIVINLSTN  DYSVGIPDKT300
TFTAVYSKFI  DNIRSEYPKA  DIYCAIGPML  NGENLDSQRD  YISGIVKSKE  ASIHNKVHFI360
EFPQQDFANG  LGEDWHPSVK  THELMAKQLA  EKIKTDLGWK  VYSGN405

Predicted 3D structure by AlphaFold2 with pLDDT = 84.27 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(189-393)

MKKRGTFLLA  ISIAMLTITP  TVDASAAGSV  KVNLFDENRI  ESINNSYPSL  NEFNCYNVSD60
IRSDNLTEKK  STSKTLLIGR  FDTSDAAGPK  FAWSNTTIKA  NFVGTGISVN  LKSTGDNWFN120
VIVDGVVQTP  INVTSTTSSP  IALVSGLEKG  KHTIELVKRT  EAFVGDVQFL  GFSVSDGKLL180
NPPKPSSKRI  LFIGDSITCG  YGNEGTDPNK  SFTTKNENAS  LAYGALTAKL  LGADPMTICW240
SGKGVLRNYG  GDPKDVMPEI  YNQVLPYNKN  LTWNPKNWVP  QVIVINLSTN  DYSVGIPDKT300
TFTAVYSKFI  DNIRSEYPKA  DIYCAIGPML  NGENLDSQRD  YISGIVKSKE  ASIHNKVHFI360
EFPQQDFANG  LGEDWHPSVK  THELMAKQLA  EKIKTDLGWK  VYSGN405

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help