Information for CAZyme ID: BAU90928.1
Basic Information
| GenBank ID | BAU90928.1 |
| Family | GT2, GT4 |
| Sequence Length | 1010 |
| UniProt ID | A0A169R0C6(100,100) |
| Average pLDDT? | 84.84 |
| CAZy50 ID | 11874 |
| CAZy50 Rep | No, ACK83336.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 223967 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum populi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MIKLPKLFRP ERRDAAAAAP FFDPAFYRSA YPDVAAGGGD PLRHYLDHGW LEGRDPSAVF | 60 |
| STLFYLDRHL SDRPPINPLL HYAGLSGAER LRVPTQPGPD FPALQAAVVE PFFDAPYYAR | 120 |
| LAGLEGGEDP LAHYLTKGWR RGLDPSDAFS GDAYLQRHAH MRRLGVSPLY HFAATRRLQA | 180 |
| SEAAAPPVRR GKPQATLLPT DPAEATDAQI YETVAAAFDR EHYLDTNADI RRSGVDPVRH | 240 |
| FLDFGAREDR DPSPDFSVRF YRKHYRREVG AGVNPFFHYL AVGRARGFRP TPFGLGTWPA | 300 |
| QVAPTPDEWK EAQAAADIAA ARAVLIMPVY KGYDDTLRAI HAVLSARQAT PFALLVIDDC | 360 |
| SPDPRLSATL ADLAARGLFV HLVNAENLGF VRTCNRGLAF AAGKDVVLLN ADIVVYGDWL | 420 |
| DRLLWHIDAD PGVATVTPFS NNATICSYPR PNVDNQTRLE VMPDEIDAFT RVCNARTSSP | 480 |
| VPTGVGFCMA MRREAIAAVG LLDAETFGRG YGEENDFCMR ALKAGFTNLL AHDVFVFHSG | 540 |
| SVSFGALLAT KGADIFRTIL TKHPDYQRRV HNHIEVDPAR FARRRLDLYR FAKRAAESTE | 600 |
| RGLALIVTHD FGGGVETHIE MLSLRLAEAG FGVVYLRTDE PGGFKLGLPG AGGIDFPVSI | 660 |
| LDPLSLDRDA DLLAELIGWL GPAMVHVHSL AGLDAPSTRA AMRLIEEAGP DYDVTLHDYA | 720 |
| AVCHRNNLVR PDGVFCGLAE PAACRDCIRL DRDADGMVLP DPADRRRLWA GFLDRARTVF | 780 |
| APSADLAGRI GPALHLDRIL LRPHEETLSG GALKLRQRRE GPLRVAVIGS IGAHKGYDVV | 840 |
| HNLALDARLR QLPIVFTIVG HSAEPRAMEA AGVRETGLYG SDAAALREIA RLDPDIALLP | 900 |
| SIWPETYCYT LSLALAAGVP PVVFDLGAQA ERLRETGEGH RLDPALAEDP QRLNAALLAL | 960 |
| PIEALWAARK PFRPTVYPRI LEDYYGLGEA APAALRASSG GLPAAAATSG | 1010 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT2(326-497)
| MIKLPKLFRP ERRDAAAAAP FFDPAFYRSA YPDVAAGGGD PLRHYLDHGW LEGRDPSAVF | 60 |
| STLFYLDRHL SDRPPINPLL HYAGLSGAER LRVPTQPGPD FPALQAAVVE PFFDAPYYAR | 120 |
| LAGLEGGEDP LAHYLTKGWR RGLDPSDAFS GDAYLQRHAH MRRLGVSPLY HFAATRRLQA | 180 |
| SEAAAPPVRR GKPQATLLPT DPAEATDAQI YETVAAAFDR EHYLDTNADI RRSGVDPVRH | 240 |
| FLDFGAREDR DPSPDFSVRF YRKHYRREVG AGVNPFFHYL AVGRARGFRP TPFGLGTWPA | 300 |
| QVAPTPDEWK EAQAAADIAA ARAVLIMPVY KGYDDTLRAI HAVLSARQAT PFALLVIDDC | 360 |
| SPDPRLSATL ADLAARGLFV HLVNAENLGF VRTCNRGLAF AAGKDVVLLN ADIVVYGDWL | 420 |
| DRLLWHIDAD PGVATVTPFS NNATICSYPR PNVDNQTRLE VMPDEIDAFT RVCNARTSSP | 480 |
| VPTGVGFCMA MRREAIAAVG LLDAETFGRG YGEENDFCMR ALKAGFTNLL AHDVFVFHSG | 540 |
| SVSFGALLAT KGADIFRTIL TKHPDYQRRV HNHIEVDPAR FARRRLDLYR FAKRAAESTE | 600 |
| RGLALIVTHD FGGGVETHIE MLSLRLAEAG FGVVYLRTDE PGGFKLGLPG AGGIDFPVSI | 660 |
| LDPLSLDRDA DLLAELIGWL GPAMVHVHSL AGLDAPSTRA AMRLIEEAGP DYDVTLHDYA | 720 |
| AVCHRNNLVR PDGVFCGLAE PAACRDCIRL DRDADGMVLP DPADRRRLWA GFLDRARTVF | 780 |
| APSADLAGRI GPALHLDRIL LRPHEETLSG GALKLRQRRE GPLRVAVIGS IGAHKGYDVV | 840 |
| HNLALDARLR QLPIVFTIVG HSAEPRAMEA AGVRETGLYG SDAAALREIA RLDPDIALLP | 900 |
| SIWPETYCYT LSLALAAGVP PVVFDLGAQA ERLRETGEGH RLDPALAEDP QRLNAALLAL | 960 |
| PIEALWAARK PFRPTVYPRI LEDYYGLGEA APAALRASSG GLPAAAATSG | 1010 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.