CAZyme3D

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Entry ID

Information for CAZyme ID: BAT90510.1

Basic Information

GenBank IDBAT90510.1
FamilyGH16_20
Sequence Length301
UniProt IDA0A0S3SCG9(100,100)Download
Average pLDDT?91.76
CAZy50 ID135536
CAZy50 RepNo, CAD1844745.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID157739
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderFabales
FamilyFabaceae
GenusVigna
SpeciesVigna angularis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSSSLSSFLP  MLPVLFLLVL  SCMIYSGSAQ  GPPSPGYYPS  SKISPISFNQ  GFKNLWGPQH60
QRIDQGSLTI  WLDTSTGSGF  KSLHSYKSGY  FGAAIKLQPG  YTAGVITSLY  LSNNQDHPGN120
HDEIDIEFLG  TTPDKPYVLQ  TNVYIRGSGD  GNIIGREMRF  HLWFDPTQDF  HNYAVLWKPS180
ELIFFVDDVP  IRRYPRKSEA  TYPTRPMYVY  GSIWDASSWA  TEGGKYKADY  RYQPFVGRYK240
NFRLQGCTSE  SSASCHPPST  SSGFGSLSPQ  QFRAMQWVQT  NYMVYNYCHD  PRRDHNLIPE300
C301

Predicted 3D structure by AlphaFold2 with pLDDT = 91.76 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH16_20(67-230)

MSSSLSSFLP  MLPVLFLLVL  SCMIYSGSAQ  GPPSPGYYPS  SKISPISFNQ  GFKNLWGPQH60
QRIDQGSLTI  WLDTSTGSGF  KSLHSYKSGY  FGAAIKLQPG  YTAGVITSLY  LSNNQDHPGN120
HDEIDIEFLG  TTPDKPYVLQ  TNVYIRGSGD  GNIIGREMRF  HLWFDPTQDF  HNYAVLWKPS180
ELIFFVDDVP  IRRYPRKSEA  TYPTRPMYVY  GSIWDASSWA  TEGGKYKADY  RYQPFVGRYK240
NFRLQGCTSE  SSASCHPPST  SSGFGSLSPQ  QFRAMQWVQT  NYMVYNYCHD  PRRDHNLIPE300
C301

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help