CAZyme3D

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Entry ID

Information for CAZyme ID: BAT78423.1

Basic Information

GenBank IDBAT78423.1
FamilyPL4_2
Sequence Length643
UniProt IDA0A0S3RCX0(100,100)Download
Average pLDDT?95.48
CAZy50 ID1816
CAZy50 RepNo, QCE15981.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID157739
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderFabales
FamilyFabaceae
GenusVigna
SpeciesVigna angularis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPLLGVQLTV  QDNHVVMENG  ILKVTLSNPG  GIVTGIQYNN  IDNLLEVLND  ESNRGYWDLV60
WSSPTSTGTS  GTFDVIKGTK  FQVMVENEDQ  VEVSFTRTWD  VSLEGKLVPL  NIDKRFIMLR120
GCSGFYSYAI  YEHLQEWPAF  NLDETRIAFK  LRKDKFHYMA  MADNRQRNMP  LPDDRLPPKG180
KALAYPEAVL  LVNPIEPELK  GEVDDKYQYS  CDNKDNKVHG  WICMDPVVGF  WVITPTDEFR240
SGGPLKQNLT  SHVGPTTLAM  FLSAHYSGED  LVPKFNAGEA  WKKVFGPVFI  YLNSSYDGGD300
PLKLWDEAKQ  QMLVEVQSWP  YSFPESEDFA  KWDERGNVSG  RLLVRERCIN  DDYISAKGAY360
VGLAPPGDVG  SWQRECKNYQ  FWAKADDDGY  FSITNVRAGD  YNVYAWVPGF  IGDYKYDVAM420
TITEGCEIDL  GELVYEPPRD  GPTLWEIGIP  DRTAAEFYVP  DPNPKYVNKL  FVNHPDKFRQ480
YGLWERYAEL  YPDKDLIYTI  GISDYTKDWF  FAQVTRKKDD  NTFQGTTWQI  KFQLDQVNKT540
SSYKLRVALA  SATLSELQVR  VNNPKNPRPL  FSSGLIGRDN  SIARHGIHGL  YWLYNVDIAG600
TQFVEGDNTI  FLTQSRGNSP  FQAIMYDYIR  LEAPPSSTFS  NTK643

Predicted 3D structure by AlphaFold2 with pLDDT = 95.48 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL4_2(11-617)

MPLLGVQLTV  QDNHVVMENG  ILKVTLSNPG  GIVTGIQYNN  IDNLLEVLND  ESNRGYWDLV60
WSSPTSTGTS  GTFDVIKGTK  FQVMVENEDQ  VEVSFTRTWD  VSLEGKLVPL  NIDKRFIMLR120
GCSGFYSYAI  YEHLQEWPAF  NLDETRIAFK  LRKDKFHYMA  MADNRQRNMP  LPDDRLPPKG180
KALAYPEAVL  LVNPIEPELK  GEVDDKYQYS  CDNKDNKVHG  WICMDPVVGF  WVITPTDEFR240
SGGPLKQNLT  SHVGPTTLAM  FLSAHYSGED  LVPKFNAGEA  WKKVFGPVFI  YLNSSYDGGD300
PLKLWDEAKQ  QMLVEVQSWP  YSFPESEDFA  KWDERGNVSG  RLLVRERCIN  DDYISAKGAY360
VGLAPPGDVG  SWQRECKNYQ  FWAKADDDGY  FSITNVRAGD  YNVYAWVPGF  IGDYKYDVAM420
TITEGCEIDL  GELVYEPPRD  GPTLWEIGIP  DRTAAEFYVP  DPNPKYVNKL  FVNHPDKFRQ480
YGLWERYAEL  YPDKDLIYTI  GISDYTKDWF  FAQVTRKKDD  NTFQGTTWQI  KFQLDQVNKT540
SSYKLRVALA  SATLSELQVR  VNNPKNPRPL  FSSGLIGRDN  SIARHGIHGL  YWLYNVDIAG600
TQFVEGDNTI  FLTQSRGNSP  FQAIMYDYIR  LEAPPSSTFS  NTK643

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help