CAZyme3D

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Entry ID

Information for CAZyme ID: BAT15719.1

Basic Information

GenBank IDBAT15719.1
FamilyGH51
Sequence Length571
UniProt IDQ0IQD3(100,100)Download
Average pLDDT?94.62
CAZy50 ID2628
CAZy50 RepNo, CAG7861148.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID39947
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderPoales
FamilyPoaceae
GenusOryza
SpeciesOryza sativa

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

CFEAGANTSN  IDPWSIIGDE  SSVHVTTDRS  SCFSQNPVAV  RIEVVCDDCP  AGGVGIYNPG60
FWGMNVEEGK  AYNLVMHIRS  LESVELTASL  TCSNGSQNLA  SNSVRETNLS  TWTKIELQLL120
AQGTCRTSRL  ELTTRKRGVI  WLDQVSLMPS  ETYKGHGFRK  ELMYMLLDLK  PRFLRFPGGC180
FVEGNWLKNA  FRWKETIGPW  EERPGHYGDV  WHYWTDDGLG  YYELLELAED  LGANPVWVLN240
IGMSHHDAVN  GTMLAPFIKD  ATDSLEFAKG  SDKSTWGSVR  ATMGHPEPFP  LKYVALGNED300
CAPFKLIYRE  NYPKFYNAIK  EAYPDIQIIS  NCDGSSGPLD  HPADLYDYHI  YENASTVFFK360
KNEFDRTSRN  GPKVFVSEYA  VNGEDAGNGS  LLASLAEAAF  LIGLEKNSDV  VQMACYAPLF420
VNDNDRVWNP  DAIVFNSWQQ  YGTPSYWMQT  YFRESSGAMI  HPIMISSSYS  DLLAASAITW480
QDAENTFLRV  KIVNFGPNAV  NLTISSSGLQ  AGVDTAKSTV  TVLTSSNLLD  ENSFSEPNKV540
VPVASELPNA  AEQMQVLHFP  YSICSFDLAL  V571

Predicted 3D structure by AlphaFold2 with pLDDT = 94.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH51(137-453)

CFEAGANTSN  IDPWSIIGDE  SSVHVTTDRS  SCFSQNPVAV  RIEVVCDDCP  AGGVGIYNPG60
FWGMNVEEGK  AYNLVMHIRS  LESVELTASL  TCSNGSQNLA  SNSVRETNLS  TWTKIELQLL120
AQGTCRTSRL  ELTTRKRGVI  WLDQVSLMPS  ETYKGHGFRK  ELMYMLLDLK  PRFLRFPGGC180
FVEGNWLKNA  FRWKETIGPW  EERPGHYGDV  WHYWTDDGLG  YYELLELAED  LGANPVWVLN240
IGMSHHDAVN  GTMLAPFIKD  ATDSLEFAKG  SDKSTWGSVR  ATMGHPEPFP  LKYVALGNED300
CAPFKLIYRE  NYPKFYNAIK  EAYPDIQIIS  NCDGSSGPLD  HPADLYDYHI  YENASTVFFK360
KNEFDRTSRN  GPKVFVSEYA  VNGEDAGNGS  LLASLAEAAF  LIGLEKNSDV  VQMACYAPLF420
VNDNDRVWNP  DAIVFNSWQQ  YGTPSYWMQT  YFRESSGAMI  HPIMISSSYS  DLLAASAITW480
QDAENTFLRV  KIVNFGPNAV  NLTISSSGLQ  AGVDTAKSTV  TVLTSSNLLD  ENSFSEPNKV540
VPVASELPNA  AEQMQVLHFP  YSICSFDLAL  V571

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help