Information for CAZyme ID: BAP57782.1
Basic Information
GenBank ID | BAP57782.1 |
Family | GT51 |
Sequence Length | 735 |
UniProt ID | A0A090ANR2(100,100)![]() |
Average pLDDT? | 87.21 |
CAZy50 ID | 31732 |
CAZy50 Rep | No, ABK17908.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 40754 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Thiotrichales |
Family | Thiotrichaceae |
Genus | Thioploca |
Species | Thioploca ingrica |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRKFIRVSLV TLLLGFSIVF GKTLLDLAPL PTTLSVTTSP IRKLQVLDRH AIPLIMTYQN | 60 |
DWNIYDYVPL HEIPELLQRI FLLAEDKRFY EHGGPDWRAR WHALFQNILA LRIVRGASTI | 120 |
TEQTVRMLYL RPRTFWSHWL QGIEASRLER HFSKADILEF YLNQVPYANQ RRGVVQAARY | 180 |
YFDRDLDTLN LKEMIALAVL IRAPSRLDLR RNKTEIEAPI VRLAQRLFEL NLISNTDYQE | 240 |
ILTTPLSLRE ASLPIQATHF VNYIYTSHAA SPLPHLGRLY TTLDAKLQSF VQLILNQRIQ | 300 |
ELQNQNVSHG AVLVVDHQTN EVLAWVNSGR PSPEISGSQI DAVTIPRQPG SALKPFLYAL | 360 |
ALEKGWTAAT LIDDAPLAEA VGVGLHDYRN YSRSYYGSLR LRDVLGNSLN IPAIRTIQFV | 420 |
SAQSFLQRLH QLGISSLTAR SDYYGDGLAL GNGGVTLLEL VQAYTVLAYQ GLFRPLKVLR | 480 |
NTSPTKAISV FTPEIASIIA DILSDSDARR LEFGRGTLLR FPIQTAVKTG TSTDYRDAWA | 540 |
VGFNHHYTVG VWLGNLDQQP MSQVSGATGS ALILRAIFAE LNRYEETQPL FLSHKLVKVN | 600 |
ICRTTGQLAT PTCPSKLEWF IPGSQPVSSD QPELTPVKPL KKAFYLKQPT PDLQLAMDPR | 660 |
IPDEYEAFAL MLSDTSLKVN SIEWVVDDEV IGTTVADTRQ LLWPIKRGQH LAQAKVWTIN | 720 |
APEPMTTPTV RFYVK | 735 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.21 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(66-216)
MRKFIRVSLV TLLLGFSIVF GKTLLDLAPL PTTLSVTTSP IRKLQVLDRH AIPLIMTYQN | 60 |
DWNIYDYVPL HEIPELLQRI FLLAEDKRFY EHGGPDWRAR WHALFQNILA LRIVRGASTI | 120 |
TEQTVRMLYL RPRTFWSHWL QGIEASRLER HFSKADILEF YLNQVPYANQ RRGVVQAARY | 180 |
YFDRDLDTLN LKEMIALAVL IRAPSRLDLR RNKTEIEAPI VRLAQRLFEL NLISNTDYQE | 240 |
ILTTPLSLRE ASLPIQATHF VNYIYTSHAA SPLPHLGRLY TTLDAKLQSF VQLILNQRIQ | 300 |
ELQNQNVSHG AVLVVDHQTN EVLAWVNSGR PSPEISGSQI DAVTIPRQPG SALKPFLYAL | 360 |
ALEKGWTAAT LIDDAPLAEA VGVGLHDYRN YSRSYYGSLR LRDVLGNSLN IPAIRTIQFV | 420 |
SAQSFLQRLH QLGISSLTAR SDYYGDGLAL GNGGVTLLEL VQAYTVLAYQ GLFRPLKVLR | 480 |
NTSPTKAISV FTPEIASIIA DILSDSDARR LEFGRGTLLR FPIQTAVKTG TSTDYRDAWA | 540 |
VGFNHHYTVG VWLGNLDQQP MSQVSGATGS ALILRAIFAE LNRYEETQPL FLSHKLVKVN | 600 |
ICRTTGQLAT PTCPSKLEWF IPGSQPVSSD QPELTPVKPL KKAFYLKQPT PDLQLAMDPR | 660 |
IPDEYEAFAL MLSDTSLKVN SIEWVVDDEV IGTTVADTRQ LLWPIKRGQH LAQAKVWTIN | 720 |
APEPMTTPTV RFYVK | 735 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.