Information for CAZyme ID: BAL84424.1
Basic Information
| GenBank ID | BAL84424.1 |
| Family | CBM34, GH13_39 |
| Sequence Length | 1042 |
| UniProt ID | I0GUI7(100,100) |
| Average pLDDT? | 90.20 |
| CAZy50 ID | 12235 |
| CAZy50 Rep | No, AIF53118.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 927704 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Negativicutes |
| Order | Selenomonadales |
| Family | Selenomonadaceae |
| Genus | Selenomonas |
| Species | Selenomonas ruminantium |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNRKESLQAA IGLSLALGLW AAPMAFPGAE IPAGLSATAE AAQAVGPTDV VLVGTVQSKL | 60 |
| GAGNDWAPAD GATIMQPVGN GKYQLKGKLP KGNYEFKVAI GGSWNENYGA GGARDGGNIS | 120 |
| LKLAAEKEVT FTYDSLSHET TVSYEGMEAD QAAAKKAEAA QGRVVVLAGT VQSKAGAQKD | 180 |
| WDPGDMATRM KPLGHDSYSL SVDLPAGTYY YKVAVGGSWA ENYGLGGNFD GANVQLTLPK | 240 |
| AQRVTFYYND KTHAIADSTS YKWLDNASLP KLSGSFGALK DDTMQDLQLA EFYQQTVELK | 300 |
| AGSYEVKVAQ KGKKSLTQTV HIKKDGAVTF YYDSKENRLI ADDGRISEKQ VMHDSWSKAY | 360 |
| RVPFEAIKAG SPVTLRLAVG KDEVSNVKAV LYKARITANG GDEYNPDFAA GTKEEYPLTL | 420 |
| KESHGGRDFW EVTLRPQENG IYGYKFVLDD TKEYGDDDKP GHTGALKLRG AKPFQLTVYS | 480 |
| ADFHTPDWAK EAVAYQIFPD RFFNGDPAND NARTTARGNQ PVQHRAWTDL PANASKSPAA | 540 |
| DGDKWECNDF FGGDIAGITQ KLDYLQKLGI TAIYVNPLSA ACSNHRYDAV DYGHIDPMLG | 600 |
| TEKELQTLAA EMQKRGMHLI MDGVFNHVGD DSIYFDRYGK YKTVGAYEYW SRIYDLMNDR | 660 |
| HMKLEAAKAE AKKQLEAEGQ VFSPWHWENW FEIRNEKTKD SMGEKYAYHD WQGFDSLTPF | 720 |
| RDDDYPGSEA GTKVSDLGDY LLRGRDGQKG VIMKWFDDGL SSWRLDVAKE VPPGFWQNVR | 780 |
| KSVKSIRTKS GDEPMLLGEI WQDGSQFLTG DQFDSVMNYK LSFAVGDLFL NQGKAEACDD | 840 |
| ELTVLRQNYP KEALYNLMNI VDSHDTVRAI YKFGGGKENV AQASRQDFDY RLGKARLKLA | 900 |
| AMFLMGYPGM PTVYYGDEAG VYGSADPDCR RTYPWGREDK ELVEFYRKVI GVRNGHKQLF | 960 |
| AHGDVQTLLA KGDVYAFGRT HANGEAAIVA LNRGSAADVE LPVTFAADGT VFTDQLTGAK | 1020 |
| VSVQNGRVKL HLQENQGMML VK | 1042 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.20 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM20(157-241)+CBM34(352-480)+GH13_39(553-928)
| MNRKESLQAA IGLSLALGLW AAPMAFPGAE IPAGLSATAE AAQAVGPTDV VLVGTVQSKL | 60 |
| GAGNDWAPAD GATIMQPVGN GKYQLKGKLP KGNYEFKVAI GGSWNENYGA GGARDGGNIS | 120 |
| LKLAAEKEVT FTYDSLSHET TVSYEGMEAD QAAAKKAEAA QGRVVVLAGT VQSKAGAQKD | 180 |
| WDPGDMATRM KPLGHDSYSL SVDLPAGTYY YKVAVGGSWA ENYGLGGNFD GANVQLTLPK | 240 |
| AQRVTFYYND KTHAIADSTS YKWLDNASLP KLSGSFGALK DDTMQDLQLA EFYQQTVELK | 300 |
| AGSYEVKVAQ KGKKSLTQTV HIKKDGAVTF YYDSKENRLI ADDGRISEKQ VMHDSWSKAY | 360 |
| RVPFEAIKAG SPVTLRLAVG KDEVSNVKAV LYKARITANG GDEYNPDFAA GTKEEYPLTL | 420 |
| KESHGGRDFW EVTLRPQENG IYGYKFVLDD TKEYGDDDKP GHTGALKLRG AKPFQLTVYS | 480 |
| ADFHTPDWAK EAVAYQIFPD RFFNGDPAND NARTTARGNQ PVQHRAWTDL PANASKSPAA | 540 |
| DGDKWECNDF FGGDIAGITQ KLDYLQKLGI TAIYVNPLSA ACSNHRYDAV DYGHIDPMLG | 600 |
| TEKELQTLAA EMQKRGMHLI MDGVFNHVGD DSIYFDRYGK YKTVGAYEYW SRIYDLMNDR | 660 |
| HMKLEAAKAE AKKQLEAEGQ VFSPWHWENW FEIRNEKTKD SMGEKYAYHD WQGFDSLTPF | 720 |
| RDDDYPGSEA GTKVSDLGDY LLRGRDGQKG VIMKWFDDGL SSWRLDVAKE VPPGFWQNVR | 780 |
| KSVKSIRTKS GDEPMLLGEI WQDGSQFLTG DQFDSVMNYK LSFAVGDLFL NQGKAEACDD | 840 |
| ELTVLRQNYP KEALYNLMNI VDSHDTVRAI YKFGGGKENV AQASRQDFDY RLGKARLKLA | 900 |
| AMFLMGYPGM PTVYYGDEAG VYGSADPDCR RTYPWGREDK ELVEFYRKVI GVRNGHKQLF | 960 |
| AHGDVQTLLA KGDVYAFGRT HANGEAAIVA LNRGSAADVE LPVTFAADGT VFTDQLTGAK | 1020 |
| VSVQNGRVKL HLQENQGMML VK | 1042 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.