CAZyme3D

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Entry ID

Information for CAZyme ID: BAH44086.1

Basic Information

GenBank IDBAH44086.1
FamilyCBM50, GH18
Sequence Length427
UniProt IDC0ZE77(100,100)Download
Average pLDDT?96.72
CAZy50 ID80301
CAZy50 RepNo, AHN23468.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID358681
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusBrevibacillus
SpeciesBrevibacillus brevis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MQIHVVEEGQ  TLASIAETYG  TTPEAIDKAN  ELPDPNKLAI  GQAMVIPIVG  SYYWVKQGDT60
LYTIGQRNHI  SAAELARVNG  ISPYKPLQVG  QKLYIPPRPR  RAADFNAYVE  PRRTVPPAME120
ADVRRAAPHL  TYLAPFSFRI  KRDGTLQRPN  LSNFPAIAKE  NQVLLMMVVT  NLEKGQFSTE180
LGALILNDQE  LQNKLLDNIL  ATAHELGMGD  IHFDLEALPT  TGAEEYANFL  RKARGRIHAA240
GLMMSVALAP  KTSAVQAGKW  YSAHDYKAIG  ALADFVVIMT  YEWGYSGGPP  MAVSPIGPVR300
RVLQYAITEI  PADKILMGQN  LYGYDWTLPY  ERGTTAKALS  PQAAIALAAR  HNAVIRYDYR360
AQAPFFTYTD  DQGKQHRVWF  EDARSIQAKF  NLVKQLGLRG  VSYWKLGLPF  PQNWLLIEEN420
FRVRKRA427

Predicted 3D structure by AlphaFold2 with pLDDT = 96.72 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(4-47)+CBM50(53-96)+GH18(176-407)

MQIHVVEEGQ  TLASIAETYG  TTPEAIDKAN  ELPDPNKLAI  GQAMVIPIVG  SYYWVKQGDT60
LYTIGQRNHI  SAAELARVNG  ISPYKPLQVG  QKLYIPPRPR  RAADFNAYVE  PRRTVPPAME120
ADVRRAAPHL  TYLAPFSFRI  KRDGTLQRPN  LSNFPAIAKE  NQVLLMMVVT  NLEKGQFSTE180
LGALILNDQE  LQNKLLDNIL  ATAHELGMGD  IHFDLEALPT  TGAEEYANFL  RKARGRIHAA240
GLMMSVALAP  KTSAVQAGKW  YSAHDYKAIG  ALADFVVIMT  YEWGYSGGPP  MAVSPIGPVR300
RVLQYAITEI  PADKILMGQN  LYGYDWTLPY  ERGTTAKALS  PQAAIALAAR  HNAVIRYDYR360
AQAPFFTYTD  DQGKQHRVWF  EDARSIQAKF  NLVKQLGLRG  VSYWKLGLPF  PQNWLLIEEN420
FRVRKRA427

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help