CAZyme3D

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Entry ID

Information for CAZyme ID: BAH13690.1

Basic Information

GenBank IDBAH13690.1
FamilyGT13
Sequence Length638
UniProt IDB7Z7Q4(100,100)Download
Average pLDDT?90.49
CAZy50 ID26097
CAZy50 RepNo, UXI17693.1
Structure Cluster-
EC Number(s)2.4.1.-
Substrates(s)-

Taxonomy

Tax ID9606
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderPrimates
FamilyHominidae
GenusHomo
SpeciesHomo sapiens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MEGTKEIKVS  NRRIQEHWTG  AVLFLLVTVI  VNIKLILDTR  RAISEANEDP  EPEQDYDEAL60
GRLEPPRRRG  SGPRRVLDVE  VYSSRSKVYV  AVDGTTVLED  EAREQGRGIH  VIVLNQATGH120
VMAKRVFDTY  SPHEDEAMVL  FLNMVAPGRV  LICTVKDEGS  FHLKDTAKAL  LRSLGSQAGP180
ALGWRDTWAF  VGRKGGPVFG  EKHSKSPALS  SWGDPVLLKT  DVPLSSAEEA  ECHWADTELN240
RRRRRFCSKV  EGYGSVCSCK  DPTPIEFSPD  PLPDNKVLNV  PVAVIAGNRP  NYLYRMLRSL300
LSAQGVSPQM  ITVFIDGYYE  EPMDVVALFG  LRGIQHTPIS  IKNARVSQHY  KASLTATFNL360
FPEAKFAVVL  EEDLDIAVDF  FSFLSQSIHL  LEEDDSLYCI  SAWNDQGYEH  TAEDPALLYR420
VETMPGLGWV  LRRSLYKEEL  EPKWPTPEKL  WDWDMWMRMP  EQRRGRECII  PDVSRSYHFG480
IVGLNMNGYF  HEAYFKKHKF  NTVPGVQLRN  VDSLKKEAYE  VEVHRLLSEA  EVLDHSKNPC540
EDSFLPDTEG  HTYVAFIRME  KDDDFTTWTQ  LAKCLHIWDL  DVRGNHRGLW  RLFRKKNHFL600
VVGVPASPYS  VKKPPSVTPI  FLEPPPKEEG  APGAPEQT638

Predicted 3D structure by AlphaFold2 with pLDDT = 90.49 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT13(274-582)

MEGTKEIKVS  NRRIQEHWTG  AVLFLLVTVI  VNIKLILDTR  RAISEANEDP  EPEQDYDEAL60
GRLEPPRRRG  SGPRRVLDVE  VYSSRSKVYV  AVDGTTVLED  EAREQGRGIH  VIVLNQATGH120
VMAKRVFDTY  SPHEDEAMVL  FLNMVAPGRV  LICTVKDEGS  FHLKDTAKAL  LRSLGSQAGP180
ALGWRDTWAF  VGRKGGPVFG  EKHSKSPALS  SWGDPVLLKT  DVPLSSAEEA  ECHWADTELN240
RRRRRFCSKV  EGYGSVCSCK  DPTPIEFSPD  PLPDNKVLNV  PVAVIAGNRP  NYLYRMLRSL300
LSAQGVSPQM  ITVFIDGYYE  EPMDVVALFG  LRGIQHTPIS  IKNARVSQHY  KASLTATFNL360
FPEAKFAVVL  EEDLDIAVDF  FSFLSQSIHL  LEEDDSLYCI  SAWNDQGYEH  TAEDPALLYR420
VETMPGLGWV  LRRSLYKEEL  EPKWPTPEKL  WDWDMWMRMP  EQRRGRECII  PDVSRSYHFG480
IVGLNMNGYF  HEAYFKKHKF  NTVPGVQLRN  VDSLKKEAYE  VEVHRLLSEA  EVLDHSKNPC540
EDSFLPDTEG  HTYVAFIRME  KDDDFTTWTQ  LAKCLHIWDL  DVRGNHRGLW  RLFRKKNHFL600
VVGVPASPYS  VKKPPSVTPI  FLEPPPKEEG  APGAPEQT638

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help