CAZyme3D

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Entry ID

Information for CAZyme ID: BAG36416.1

Basic Information

GenBank IDBAG36416.1
FamilyGT17
Sequence Length531
UniProt IDB2R969(100,100)Download
Average pLDDT?76.66
CAZy50 ID61008
CAZy50 RepNo, AWP05216.1
Structure Cluster-
EC Number(s)2.4.1.144
Substrates(s)-

Taxonomy

Tax ID9606
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderPrimates
FamilyHominidae
GenusHomo
SpeciesHomo sapiens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRRYKLFLMF  CMAGLCLISF  LHFFKTLSYV  TFPRELASLS  PNLVSSFFWN  NAPVTPQASP60
EPGGPDLLRT  PLYSHSPLLQ  PLPPSKAAEE  LHRVDLVLPE  DTTEYFVRTK  AGGVCFKPGT120
KMLERPPPGR  PEEKPEGANG  SSARRPPRYL  LSARERTGGR  GARRKWVECV  CLPGWHGPSC180
GVPTVVQYSN  LPTKERLVPR  EVPRRVINAI  NVNHEFDLLD  VRFHELGDVV  DAFVVCESNF240
TAYGEPRPLK  FREMLTNGTF  EYIRHKVLYV  FLDHFPPGGR  QDGWIADDYL  RTFLTQDGVS300
RLRNLRPDDV  FIIDDADEIP  ARDGVLFLKL  YDGWTEPFAF  HMRKSLYGFF  WKQPGTLEVV360
SGCTVDMLQA  VYGLDGIRLR  RRQYYTMPNF  RQYENRTGHI  LVQWSLGSPL  HFAGWHCSWC420
FTPEGIYFKL  VSAQNGDFPR  WGDYEDKRDL  NYIRGLIRTG  GWFDGTQQEY  PPADPSEHMY480
APKYLLKNYD  RFHYLLDNPY  QEPRSTAAGG  WRHRGPEGRP  PARGKLDEAE  V531

Predicted 3D structure by AlphaFold2 with pLDDT = 76.66 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT17(180-497)

MRRYKLFLMF  CMAGLCLISF  LHFFKTLSYV  TFPRELASLS  PNLVSSFFWN  NAPVTPQASP60
EPGGPDLLRT  PLYSHSPLLQ  PLPPSKAAEE  LHRVDLVLPE  DTTEYFVRTK  AGGVCFKPGT120
KMLERPPPGR  PEEKPEGANG  SSARRPPRYL  LSARERTGGR  GARRKWVECV  CLPGWHGPSC180
GVPTVVQYSN  LPTKERLVPR  EVPRRVINAI  NVNHEFDLLD  VRFHELGDVV  DAFVVCESNF240
TAYGEPRPLK  FREMLTNGTF  EYIRHKVLYV  FLDHFPPGGR  QDGWIADDYL  RTFLTQDGVS300
RLRNLRPDDV  FIIDDADEIP  ARDGVLFLKL  YDGWTEPFAF  HMRKSLYGFF  WKQPGTLEVV360
SGCTVDMLQA  VYGLDGIRLR  RRQYYTMPNF  RQYENRTGHI  LVQWSLGSPL  HFAGWHCSWC420
FTPEGIYFKL  VSAQNGDFPR  WGDYEDKRDL  NYIRGLIRTG  GWFDGTQQEY  PPADPSEHMY480
APKYLLKNYD  RFHYLLDNPY  QEPRSTAAGG  WRHRGPEGRP  PARGKLDEAE  V531

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help