Information for CAZyme ID: BAF91416.1
Basic Information
GenBank ID | BAF91416.1 |
Family | GT80 |
Sequence Length | 497 |
UniProt ID | A8R0T5(100,100)![]() |
Average pLDDT? | 93.19 |
CAZy50 ID | 41694 |
CAZy50 Rep | No, BAA25316.1 |
Structure Cluster | - |
EC Number(s) | 2.4.99.1 |
Substrates(s) | - |
Taxonomy
Tax ID | 553611 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Vibrionales |
Family | Vibrionaceae |
Genus | Photobacterium |
Species | Photobacterium leiognathi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKRIFCLVSA ILLSACNDNQ NTVDVVVSTV NDNVIENNTY QVKPIDTPTT FDSYSWIQTC | 60 |
GTPILKDDEK YSLSFDFVAP ELDQDEKFCF EFTGDVDGKR YVTQTNLTVV APTLEVYVDH | 120 |
ASLPSLQQLM KIIQQKNEYS QNERFISWGR IRLTEDNAEK LNAHIYPLAG NNTSQELVDA | 180 |
VIDYADSKNR LNLELNTNTG HSFRNIAPIL RATSSKNNIL ISNINLYDDG SAEYVSLYNW | 240 |
KDTDNKSQKL SDSFLVLKDY LNGISSEKPN GIYSIYNWHQ LYHSSYYFLR KDYLTVETKL | 300 |
HDLREYLGGS LKQMSWDTFS QLSKGDKELF LNIVGFDQEK LQQEYQQSEL PNFVFTGTTT | 360 |
WAGGETKEYY AQQQVNVVNN AINETSPYYL GREHDLFFKG HPRGGIINDI ILGSFNNMID | 420 |
IPAKVSFEVL MMTGMLPDTV GGIASSLYFS IPAEKVSFIV FTSSDTITDR EDALKSPLVQ | 480 |
VMMTLGIVKE KDVLFWC | 497 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.19 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT80(113-491)
MKRIFCLVSA ILLSACNDNQ NTVDVVVSTV NDNVIENNTY QVKPIDTPTT FDSYSWIQTC | 60 |
GTPILKDDEK YSLSFDFVAP ELDQDEKFCF EFTGDVDGKR YVTQTNLTVV APTLEVYVDH | 120 |
ASLPSLQQLM KIIQQKNEYS QNERFISWGR IRLTEDNAEK LNAHIYPLAG NNTSQELVDA | 180 |
VIDYADSKNR LNLELNTNTG HSFRNIAPIL RATSSKNNIL ISNINLYDDG SAEYVSLYNW | 240 |
KDTDNKSQKL SDSFLVLKDY LNGISSEKPN GIYSIYNWHQ LYHSSYYFLR KDYLTVETKL | 300 |
HDLREYLGGS LKQMSWDTFS QLSKGDKELF LNIVGFDQEK LQQEYQQSEL PNFVFTGTTT | 360 |
WAGGETKEYY AQQQVNVVNN AINETSPYYL GREHDLFFKG HPRGGIINDI ILGSFNNMID | 420 |
IPAKVSFEVL MMTGMLPDTV GGIASSLYFS IPAEKVSFIV FTSSDTITDR EDALKSPLVQ | 480 |
VMMTLGIVKE KDVLFWC | 497 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.