CAZyme3D

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Entry ID

Information for CAZyme ID: BAF67633.1

Basic Information

GenBank IDBAF67633.1
FamilyGT51
Sequence Length727
UniProt IDA0A0H3KCS5(100,100)Download
Average pLDDT?87.06
CAZy50 ID23377
CAZy50 RepNo, UTH12846.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID426430
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus aureus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTENKGSSQP  KKNGNNGGKS  NSKKNRNVKR  TIIKIIGFMI  IAFFVVLLLG  ILLFAYYAWK60
APAFTEAKLQ  DPIPAKIYDK  NGELVKTLDN  GQRHEHVNLK  DVPKSMKDAV  LATEDNRFYE120
HGALDYKRLF  GAIGKNLTGG  FGSEGASTLT  QQVVKDAFLS  QHKSIGRKAQ  EAYLSYRLEQ180
EYSKDDIFQV  YLNKIYYSDG  VTGIKAAAKY  YFNKDLKDLN  LAEEAYLAGL  PQVPNNYNIY240
DHPKAAEDRK  NTVLYLMHYH  KRITDKQWED  AKKIDLKANL  VNRTPEERQN  IDTNQDSEYN300
SYVNFVKSEL  MNNKAFKDEN  LGNVLQSGIK  IYTNMDKDVQ  KTLQNDVDNG  SFYKNKDQQV360
GATILDSKTG  GLVAISGGRD  FKDVVNRNQA  TDPHPTGSSL  KPFLAYGPAI  ENMKWATNHA420
IQDESSYQVD  GSTFRNYDTK  SHGTVSIYDA  LRQSFNIPAL  KAWQSVKQNA  GNDAPKKFAA480
KLGLNYEGDI  GPSEVLGGSA  SEFSPTQLAS  AFAAIANGGT  YNNAHSIQKV  VTRDGETIEY540
DHTSHKAMSD  YTAYMLAEML  KGTFKPYGSA  YGHGVSGVNM  GAKTGTGTYG  AETYSQYNLP600
DNAAKDVWIN  GFTPQYTMSV  WMGFSKVKQY  GENSFVGHSQ  QEYPQFLYEN  VMSKISSRDG660
EDFKRPSSVS  GSIPSINVSG  SQDNNTTNRS  THGGSDTSAN  SSGTAQSNNN  TRSQQSRNSG720
GLTGIFN727

Predicted 3D structure by AlphaFold2 with pLDDT = 87.06 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(82-257)

MTENKGSSQP  KKNGNNGGKS  NSKKNRNVKR  TIIKIIGFMI  IAFFVVLLLG  ILLFAYYAWK60
APAFTEAKLQ  DPIPAKIYDK  NGELVKTLDN  GQRHEHVNLK  DVPKSMKDAV  LATEDNRFYE120
HGALDYKRLF  GAIGKNLTGG  FGSEGASTLT  QQVVKDAFLS  QHKSIGRKAQ  EAYLSYRLEQ180
EYSKDDIFQV  YLNKIYYSDG  VTGIKAAAKY  YFNKDLKDLN  LAEEAYLAGL  PQVPNNYNIY240
DHPKAAEDRK  NTVLYLMHYH  KRITDKQWED  AKKIDLKANL  VNRTPEERQN  IDTNQDSEYN300
SYVNFVKSEL  MNNKAFKDEN  LGNVLQSGIK  IYTNMDKDVQ  KTLQNDVDNG  SFYKNKDQQV360
GATILDSKTG  GLVAISGGRD  FKDVVNRNQA  TDPHPTGSSL  KPFLAYGPAI  ENMKWATNHA420
IQDESSYQVD  GSTFRNYDTK  SHGTVSIYDA  LRQSFNIPAL  KAWQSVKQNA  GNDAPKKFAA480
KLGLNYEGDI  GPSEVLGGSA  SEFSPTQLAS  AFAAIANGGT  YNNAHSIQKV  VTRDGETIEY540
DHTSHKAMSD  YTAYMLAEML  KGTFKPYGSA  YGHGVSGVNM  GAKTGTGTYG  AETYSQYNLP600
DNAAKDVWIN  GFTPQYTMSV  WMGFSKVKQY  GENSFVGHSQ  QEYPQFLYEN  VMSKISSRDG660
EDFKRPSSVS  GSIPSINVSG  SQDNNTTNRS  THGGSDTSAN  SSGTAQSNNN  TRSQQSRNSG720
GLTGIFN727

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help