Information for CAZyme ID: BAD46779.1
Basic Information
| GenBank ID | BAD46779.1 |
| Family | GH2 |
| Sequence Length | 704 |
| UniProt ID | Q650P5(100,100) |
| Average pLDDT? | 95.77 |
| CAZy50 ID | 36312 |
| CAZy50 Rep | No, QRO23471.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 295405 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRKLSYLIIV CLCLCSGVIP LMARQVTAFN TGWQFKKGPF ATDPMRAASQ WDGKWETVEI | 60 |
| PHTWNAMDMQ VQSGSFYDGA GYYRKTQFFP HDLEGKRVFL RFEGVGACAE VYVNGKLAGT | 120 |
| HKGGYSAFAC EIGTALKLGA ENEIIVKADN KARPDVIPVN QNLFGVYGGI YRPVWLIVTE | 180 |
| QNNITVTDCA SPGVYITQKD VSKKSADITV KVKLDNAGLQ PAAVTLENTI YTQEGRKVGT | 240 |
| HSRSFDLSPQ GTQTYLSTFK LKNPHLWQGR KDPYLYKVVC RLMADGKVID EVVQPLGVRK | 300 |
| YEIVAGKGFF LNGEKYPMYG VTRHQDWWGL GSALKNEHHD FDLAAIMDVG ATTVRFAHYQ | 360 |
| QSDYLYSRCD TLGLIIWAEI PCVNRVTGYE TENAQSQLRE LIRQSFNHPS IYVWGLHNEV | 420 |
| YQPHEYTAAL TRSLHDLAKT EDPDRYTVSV NGYGHMDHPV NLNADIQGMN RYFGWYEKKI | 480 |
| QDIKPWVEQL EKDYPYQKLM LTEYGADANL AHQTEYLGDA LNWGKPFYPE TFQTKTHEYQ | 540 |
| WSIIKDHPYI IASYLWNMFD FAVPMWARGG VPARNMKGLI TFDRKTKKDS YFWYKANWSE | 600 |
| EPVLYLTQRR NADREKRTTA VTVYSNIGTP KVYLNGQELS GIRNGYTDVH YVFDNVSLAD | 660 |
| GKNILKAVVS TKGKEYTDEI EWNYSGEKNR EIDSYENKNE HSGF | 704 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.77 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(23-603)
| 0 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.