CAZyme3D

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Entry ID

Information for CAZyme ID: BAD12010.1

Basic Information

GenBank IDBAD12010.1
FamilyGH9
Sequence Length411
UniProt IDQ760G7(100,100)Download
Average pLDDT?98.57
CAZy50 ID1443
CAZy50 RepNo, QWG08408.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID60588
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderBlattodea
FamilyTermitidae
GenusOdontotermes
SpeciesOdontotermes formosanus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

KLPADQKVTW  RKDSALNDKG  QNGEDLTGGY  YDAGDYVKFG  FPMAATATVL  AWGLVDYAAG60
YTSAGALDDG  RKAVKWATDY  FLKAHTAPTE  LYGQVGEGDL  DHSYWGRPED  MTMSRPAFKI120
DASNPGSDLA  GETAAALAAA  SIVFKTVDPS  YSNNLLTHAK  QLFDFANNYR  GKYSDSITDA180
NSYYSSYDYR  DELVWAAAWL  YRATNDITYL  NTAESLYNQF  GLQDWNGGFS  WDAKVSGVQL240
LLAKLTNKQQ  YKDAIKGYVD  YLINTQQKTP  KGLLFIDVWG  SLRHASNAAF  VILQAADLGI300
SAVSYRQFAK  KQIDYALGDG  GRSLVVGFGN  NPPTHPHHAS  SSCPDAPAVC  DWSTYSSPDP360
NFHVLTGALV  GGPDVNDNYV  DDRNDYVQNE  VACDYNAGFQ  SAVSALVTLG  Y411

Predicted 3D structure by AlphaFold2 with pLDDT = 98.57 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH9(3-403)

KLPADQKVTW  RKDSALNDKG  QNGEDLTGGY  YDAGDYVKFG  FPMAATATVL  AWGLVDYAAG60
YTSAGALDDG  RKAVKWATDY  FLKAHTAPTE  LYGQVGEGDL  DHSYWGRPED  MTMSRPAFKI120
DASNPGSDLA  GETAAALAAA  SIVFKTVDPS  YSNNLLTHAK  QLFDFANNYR  GKYSDSITDA180
NSYYSSYDYR  DELVWAAAWL  YRATNDITYL  NTAESLYNQF  GLQDWNGGFS  WDAKVSGVQL240
LLAKLTNKQQ  YKDAIKGYVD  YLINTQQKTP  KGLLFIDVWG  SLRHASNAAF  VILQAADLGI300
SAVSYRQFAK  KQIDYALGDG  GRSLVVGFGN  NPPTHPHHAS  SSCPDAPAVC  DWSTYSSPDP360
NFHVLTGALV  GGPDVNDNYV  DDRNDYVQNE  VACDYNAGFQ  SAVSALVTLG  Y411

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help