CAZyme3D

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Entry ID

Information for CAZyme ID: BAB69731.1

Basic Information

GenBank IDBAB69731.1
FamilyGH31
Sequence Length278
UniProt IDQ95LM6(100,100)Download
Average pLDDT?90.25
CAZy50 ID3944
CAZy50 RepNo, CDR40638.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID9541
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderPrimates
FamilyCercopithecidae
GenusMacaca
SpeciesMacaca fascicularis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRAWWANMFS  YDNYEGSAPN  LFVWNDMNEP  SVFNGPEVTM  LKDAQHYGGW  EHRDVHNIYG60
LYVHMATADG  LRQRSGGMER  PFVLARAFFA  GSQRFGAVRT  GDNTAEWDHL  KISIPMCLSL120
GLVGLSFCGA  DVGGFFKNPE  PELLVRWYQM  GAYQPFFRAH  AHLDTGRREP  WLLPSQHNDI180
IRDALGQRYS  LLPFWYTLFY  HAHREGIPIM  RPLWVQYPQD  VTTFSIDDQY  LLGDALLVHP240
VSDSVPACNS  KQYPCVPAWR  DNRASMDASA  AVFRMYEG278

Predicted 3D structure by AlphaFold2 with pLDDT = 90.25 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH31(2-244)

MRAWWANMFS  YDNYEGSAPN  LFVWNDMNEP  SVFNGPEVTM  LKDAQHYGGW  EHRDVHNIYG60
LYVHMATADG  LRQRSGGMER  PFVLARAFFA  GSQRFGAVRT  GDNTAEWDHL  KISIPMCLSL120
GLVGLSFCGA  DVGGFFKNPE  PELLVRWYQM  GAYQPFFRAH  AHLDTGRREP  WLLPSQHNDI180
IRDALGQRYS  LLPFWYTLFY  HAHREGIPIM  RPLWVQYPQD  VTTFSIDDQY  LLGDALLVHP240
VSDSVPACNS  KQYPCVPAWR  DNRASMDASA  AVFRMYEG278

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help