Information for CAZyme ID: BAB31822.1
Basic Information
GenBank ID | BAB31822.1 |
Family | GT13 |
Sequence Length | 638 |
UniProt ID | Q91X88(100,100)![]() |
Average pLDDT? | 89.75 |
CAZy50 ID | 26097 |
CAZy50 Rep | No, UXI17693.1 |
Structure Cluster | - |
EC Number(s) | 2.4.1.- |
Substrates(s) | - |
Taxonomy
Tax ID | 10090 |
Kingdom | Eukaryota |
Phylum | Chordata |
Class | Mammalia |
Order | Rodentia |
Family | Muridae |
Genus | Mus |
Species | Mus musculus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MEGTKEVKDS NGKIQDHGTG AVLFLLVTVI VNIKLILDTR RAISEANEDP EPEQDYDEAL | 60 |
GRLESPRRRG SSPRRVLDVE VYSSRSKVYV AVDGTTVLED EAREQGRGIH VIVLNQATGH | 120 |
VMAKRVFDTY SPHEDEAMVL FLNMVAPGRV LICTVKDEGS FHLKDTAKAL LRSLGSQAGP | 180 |
ALGWRDTWAF VGRKGGPVLG EKHSKSPALS SWGDPVLLKT DVPLSSAEEA ECHWADTELN | 240 |
RRRRRFCSKV EGYGSVCSCK DPTPIEFSPD PLPDNKVLNV PVAVIAGNRP NYLYRMLRSL | 300 |
LSAQGVSPQM ITVFIDGYYE EPMDVVALFG LRGIQHTPIS IKNARVSQHY KASLTATFNL | 360 |
FPEAKFAVVL EEDLDIAVDF FSFLSQSIHL LEEDDSLYCI SAWNDQGYEH TAEDPALLYR | 420 |
VETMPGLGWV LRKSLYKEEL EPKWPTPEKL WDWDMWMRMP EQRRGRECII PDVSRSYHFG | 480 |
IVGLNMNGYF HEAYFKKHKF NTVPGVQLRN VDSLKKEAYE VEIHRLLSEA EVLDHSKDPC | 540 |
EDSFLPDTEG HTYVAFIRME TDDDFATWTQ LAKCLHIWDL DVRGNHRGLW RLFRKKNHFL | 600 |
VVGVPASPYS VKKPPSVTPI FLEPPPKEEG APGAAEQT | 638 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.75 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT13(274-582)
MDDWKPSPLI KPFGARKKRS WYLTWKYKLT NQRALRRFCQ TGAVLFLLVT VIVNIKLILD | 60 |
TRRAISEANE DPEPEQDYDE ALGRLESPRR RGSSPRRVLD VEVYSSRSKV YVAVDGTTVL | 120 |
EDEAREQGRG IHVIVLNQAT GHVMAKRVFD TYSPHEDEAM VLFLNMVAPG RVLICTVKDE | 180 |
GSFHLKDTAK ALLRSLGSQA GPALGWRDTW AFVGRKGGPV LGEKHSKSPA LSSWGDPVLL | 240 |
KTDVPLSSAE EAECHWADTE LNRRRRRFCS KVEGYGSVCS CKDPTPIEFS PDPLPDNKVL | 300 |
NVPVAVIAGN RPNYLYRMLR SLLSAQGVSP QMITVFIDGY YEEPMDVVAL FGLRGIQHTP | 360 |
ISIKNARVSQ HYKASLTATF NLFPEAKFAV VLEEDLDIAV DFFSFLSQSI HLLEEDDSLY | 420 |
CISAWNDQGY EHTAEDPALL YRVETMPGLG WVLRKSLYKE ELEPKWPTPE KLWDWDMWMR | 480 |
MPEQRRGREC IIPDVSRSYH FGIVGLNMNG YFHEAYFKKH KFNTVPGVQL RNVDSLKKEA | 540 |
YEVEIHRLLS EAEVLDHSKD PCEDSFLPDT EGHTYVAFIR METDDDFATW TQLAKCLHIW | 600 |
DLDVRGNHRG LWRLFRKKNH FLVVGVPASP YSVKKPPSVT PIFLEPPPKE EGAPGAAEQT | 660 |
660 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.