Information for CAZyme ID: BAB03157.1
Basic Information
GenBank ID | BAB03157.1 |
Family | CBM18, GH19 |
Sequence Length | 322 |
UniProt ID | P19171(100,100)![]() |
Average pLDDT? | 89.30 |
CAZy50 ID | 39117 |
CAZy50 Rep | No, WIA22355.1 |
Structure Cluster | - |
EC Number(s) | 3.2.1.14 |
Substrates(s) | chitin |
Taxonomy
Tax ID | 3702 |
Kingdom | Eukaryota |
Phylum | Streptophyta |
Class | Magnoliopsida |
Order | Brassicales |
Family | Brassicaceae |
Genus | Arabidopsis |
Species | Arabidopsis thaliana |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKTNLFLFLI FSLLLSLSSA EQCGRQAGGA LCPNGLCCSE FGWCGNTEPY CKQPGCQSQC | 60 |
TPGGTPPGPT GDLSGIISSS QFDDMLKHRN DAACPARGFY TYNAFITAAK SFPGFGTTGD | 120 |
TATRKKEVAA FFGQTSHETT GGWATAPDGP YSWGYCFKQE QNPASDYCEP SATWPCASGK | 180 |
RYYGRGPMQL SWNYNYGLCG RAIGVDLLNN PDLVANDAVI AFKAAIWFWM TAQPPKPSCH | 240 |
AVIAGQWQPS DADRAAGRLP GYGVITNIIN GGLECGRGQD GRVADRIGFY QRYCNIFGVN | 300 |
PGGNLDCYNQ RSFVNGLLEA AI | 322 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.30 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM18(22-60)+GH19(75-307)
MPPQKENHRT LNKMKTNLFL FLIFSLLLSL SSAEQCGRQA GGALCPNGLC CSEFGWCGNT | 60 |
EPYCKQPGCQ SQCTPGGTPP GPTGDLSGII SSSQFDDMLK HRNDAACPAR GFYTYNAFIT | 120 |
AAKSFPGFGT TGDTATRKKE VAAFFGQTSH ETTGGWATAP DGPYSWGYCF KQEQNPASDY | 180 |
CEPSATWPCA SGKRYYGRGP MQLSWNYNYG LCGRAIGVDL LNNPDLVAND AVIAFKAAIW | 240 |
FWMTAQPPKP SCHAVIAGQW QPSDADRAAG RLPGYGVITN IINGGLECGR GQDGRVADRI | 300 |
GFYQRYCNIF GVNPGGNLDC YNQRSFVNGL LEAAI | 335 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.