CAZyme3D

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Entry ID

Information for CAZyme ID: BAA85252.1

Basic Information

GenBank IDBAA85252.1
FamilyGH62
Sequence Length328
UniProt IDQ9UVX6(100,100)Download
Average pLDDT?93.92
CAZy50 ID22371
CAZy50 RepNo, CCK27711.1
Structure Cluster-
EC Number(s)3.2.1.55
Substrates(s)arabinan

Taxonomy

Tax ID41058
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusAspergillus
SpeciesAspergillus sojae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKVTKKVLDQ  SLCCTALLAL  VGGAAAQCAL  PSSYSWTSTG  ALAEPKAGWA  ALKDFTNVVF60
NGQHIVYGSV  ADTSGNYGSM  NFGPFSDWSE  MASASQNAMS  QGTVAPTLFY  FAPKDVWILA120
YQWGPTSFSY  KTSSDPTDAN  GWSAAQPLFS  GTISDSDTGV  IDQTVIGDDT  DMYLFFAGDN180
GKIYRASMPI  DNFPGDFGTQ  SEIILSDTKE  NLFEAVQVYT  VDGQNKYLMI  VEAMGANGRY240
FRSFTADSLD  GEWTVQAGTE  SQPFAGKANS  GATWTNDISH  GDLVRNNPDQ  TMTVDPCNLQ300
LLYQGRDPNA  SGDYNLLPWK  PGVLTLQV328

Predicted 3D structure by AlphaFold2 with pLDDT = 93.92 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH62(28-298)

MKVTKKVLDQ  SLCCTALLAL  VGGAAAQCAL  PSSYSWTSTG  ALAEPKAGWA  ALKDFTNVVF60
NGQHIVYGSV  ADTSGNYGSM  NFGPFSDWSE  MASASQNAMS  QGTVAPTLFY  FAPKDVWILA120
YQWGPTSFSY  KTSSDPTDAN  GWSAAQPLFS  GTISDSDTGV  IDQTVIGDDT  DMYLFFAGDN180
GKIYRASMPI  DNFPGDFGTQ  SEIILSDTKE  NLFEAVQVYT  VDGQNKYLMI  VEAMGANGRY240
FRSFTADSLD  GEWTVQAGTE  SQPFAGKANS  GATWTNDISH  GDLVRNNPDQ  TMTVDPCNLQ300
LLYQGRDPNA  SGDYNLLPWK  PGVLTLQV328

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help