CAZyme3D

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Entry ID

Information for CAZyme ID: BAA82316.1

Basic Information

GenBank IDBAA82316.1
FamilyCBM36, GH11
Sequence Length354
UniProt IDQ9RC94(100,100)Download
Average pLDDT?92.54
CAZy50 ID24162
CAZy50 RepNo, AUG57751.1
Structure Cluster-
EC Number(s)3.2.1.8
Substrates(s)xylan

Taxonomy

Tax ID98930
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus sp. 41M-1

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKQVKIMFLM  TMFLGIGLLF  FSENAEAAIT  SNEIGTHDGY  DYEFWKDSGG  SGSMTLNSGG60
TFSAQWSNVN  NILFRKGKKF  DETQTHQQIG  NMSINYGATY  NPNGNSYLTV  YGWTVDPLVE120
FYIVDSWGTW  RPPGGTPKGT  INVDGGTYQI  YETTRYNQPS  IKGTATFQQY  WSVRTSKRTS180
GTISVSEHFR  AWESLGMNMG  NMYEVALTVE  GYQSSGSANV  YSNTLTIGGQ  SGGEQATRVE240
AESMTKGGPY  TSNITSPFNG  VALYANGDNV  SFNHSFTKAN  SSFSLRGASN  NSNMARVDLR300
IGGQNRGTFY  FGDQYPAVYT  INNINHGIGN  QLVELIVTAD  DGTWDAYLDY  LEIR354

Predicted 3D structure by AlphaFold2 with pLDDT = 92.54 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH11(38-220)+CBM36(240-353)

MKQVKIMFLM  TMFLGIGLLF  FSENAEAAIT  SNEIGTHDGY  DYEFWKDSGG  SGSMTLNSGG60
TFSAQWSNVN  NILFRKGKKF  DETQTHQQIG  NMSINYGATY  NPNGNSYLTV  YGWTVDPLVE120
FYIVDSWGTW  RPPGGTPKGT  INVDGGTYQI  YETTRYNQPS  IKGTATFQQY  WSVRTSKRTS180
GTISVSEHFR  AWESLGMNMG  NMYEVALTVE  GYQSSGSANV  YSNTLTIGGQ  SGGEQATRVE240
AESMTKGGPY  TSNITSPFNG  VALYANGDNV  SFNHSFTKAN  SSFSLRGASN  NSNMARVDLR300
IGGQNRGTFY  FGDQYPAVYT  INNINHGIGN  QLVELIVTAD  DGTWDAYLDY  LEIR354

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help