CAZyme3D

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Entry ID

Information for CAZyme ID: BAA23489.1

Basic Information

GenBank IDBAA23489.1
FamilyGH46
Sequence Length302
UniProt IDO24825(100,100)Download
Average pLDDT?89.33
CAZy50 ID109239
CAZy50 RepNo, AIY41738.1
Structure Cluster-
EC Number(s)3.2.1.132
Substrates(s)chitosan

Taxonomy

Tax ID79264
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus ehimensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MHMSNAKPSK  SPARKLLALL  CCFTLLASLF  GATALFQPSK  AAAASPDENF  SPETLQFLRD60
RTGLDGEQWN  NIMKLINKPE  QDDLNWIKYY  GYCEDINDER  GYSIGIFGAT  TGGPRDTHPD120
GPELFKAYDA  AKGAGNPSVE  GALKRLGING  KMKGSILEIK  DSEKVFCGKI  KKLQNDPAWR180
KAMWETFYNV  YIRYSVEQAR  QRGFTSALTI  GSFVDTALNQ  GATGDSNTLQ  GLLARSGSST240
NEKTFLKKFH  AKRTLVVDTN  EYNQPPNGKN  RVKQWDTLLD  MGKMNLKNVD  AEIAQVTNWE300
MK302

Predicted 3D structure by AlphaFold2 with pLDDT = 89.33 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH46(63-287)

MHMSNAKPSK  SPARKLLALL  CCFTLLASLF  GATALFQPSK  AAAASPDENF  SPETLQFLRD60
RTGLDGEQWN  NIMKLINKPE  QDDLNWIKYY  GYCEDINDER  GYSIGIFGAT  TGGPRDTHPD120
GPELFKAYDA  AKGAGNPSVE  GALKRLGING  KMKGSILEIK  DSEKVFCGKI  KKLQNDPAWR180
KAMWETFYNV  YIRYSVEQAR  QRGFTSALTI  GSFVDTALNQ  GATGDSNTLQ  GLLARSGSST240
NEKTFLKKFH  AKRTLVVDTN  EYNQPPNGKN  RVKQWDTLLD  MGKMNLKNVD  AEIAQVTNWE300
MK302

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help