Information for CAZyme ID: BAA10965.1
Basic Information
GenBank ID | BAA10965.1 |
Family | CBM11, CBM30, GH51 |
Sequence Length | 1053 |
UniProt ID | P71329(100,100)![]() |
Average pLDDT? | 89.08 |
CAZy50 ID | 11803 |
CAZy50 Rep | No, AIF25916.1 |
Structure Cluster | - |
EC Number(s) | 3.2.1.4 |
Substrates(s) | beta-glucan |
Taxonomy
Tax ID | 59374 |
Kingdom | Bacteria |
Phylum | Fibrobacterota |
Class | Fibrobacteria |
Order | Fibrobacterales |
Family | Fibrobacteraceae |
Genus | Fibrobacter |
Species | Fibrobacter succinogenes |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MIKQSLKVAS LAVLGLSVTA AMAQPKRPHL AVYKFFDEQY RPGGYDYSYG GTSKGVTITK | 60 |
SGGYKSKAAL NIKLDPKEYS GASICLYNEF FDLNKYMLDS KVEFMIKGKN GGESVKVGLL | 120 |
DEEVSDGKKT QVVLPMNKYI EGGAVTTDWK KVSIPLVDFP DRGLYWDNTR KSEFPSRIDW | 180 |
DKIAEIRFSI DKSAASEFEV WVDNIEIVKG NKKAAPKKQM VYWDENNDII DGPKNPEKLD | 240 |
GKAKTLATFY DNQVKGFSYS YGGLTAQREA QSKTPGNKNV LAMYIDNNDW SGVTYSLGEG | 300 |
KFIDLSKVRD KGGLYFWIKG KLGGEKLYVG ILDNQGNDIK SQTKVGLNDW IKVSKDWQLA | 360 |
KIPLKRFTDK GKAWDANKSA EVAKDIKWDK IQEIRFSVGK GENAGEPGKP APVTVFVDQI | 420 |
TFTSNIDWVD PDLKWDSFKS NAPDYVISDF EGKFAKDKWE PSTGPKSQLK FKVENCAEFK | 480 |
SNCLNIEHYL LADWVDVVLD MQKNGRPAAD RDWTKHWGIM FDVYSEKAWQ SITVQVQDAG | 540 |
NEIFVSNVGA PKGKTTILVP FRTFGKFPYY QPPNAVENGL FDLKGVTALD FKPSGEGTAG | 600 |
GFKVDNIRLT NQREVKAKER PAVIKVLVKG EKDVLNPNIS GGLFGINAAL WDGDMLDNKN | 660 |
FKVQTREYAK RINHGIIRYP GGLRADDDHW KEILDNHDWM VDTDEFLEWL KKTGSNAMFT | 720 |
VNFGSGTEKE AADWVKHTNI DKKAGILYWE IGNEIYGNWH PYYEKYGKDG GTIYGKRARK | 780 |
FIEAMKKVDP TIKVAVLGVL EGDWNDKVLA ETGDIADGLI VHHYPQHFGE ENDFAMLSAP | 840 |
QTLTAIYERL HKVVDKWTKK YNKDKKIELW LTEWNSVDFN PGPQTLSVEN GLFVADYLGM | 900 |
LATENVDNAQ YWDIHNDITP EGGDYGYLTR SGEECMNCPR PSYWAFQMAS DALRGKLMKT | 960 |
TIKGDEDALL TAYWTVNGNK KQLLLVNKSP YSEFDIKLDI PGFKGKAKVQ TLDKTSEKLK | 1020 |
EGWANDPSKK AKTVDISKGI KVGKRTLTLI TLE | 1053 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.08 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM11(47-208)+CBM11(250-404)+CBM11(447-611)+GH51(648-1020)
MIKQSLKVAS LAVLGLSVTA AMAQPKRPHL AVYKFFDEQY RPGGYDYSYG GTSKGVTITK | 60 |
SGGYKSKAAL NIKLDPKEYS GASICLYNEF FDLNKYMLDS KVEFMIKGKN GGESVKVGLL | 120 |
DEEVSDGKKT QVVLPMNKYI EGGAVTTDWK KVSIPLVDFP DRGLYWDNTR KSEFPSRIDW | 180 |
DKIAEIRFSI DKSAASEFEV WVDNIEIVKG NKKAAPKKQM VYWDENNDII DGPKNPEKLD | 240 |
GKAKTLATFY DNQVKGFSYS YGGLTAQREA QSKTPGNKNV LAMYIDNNDW SGVTYSLGEG | 300 |
KFIDLSKVRD KGGLYFWIKG KLGGEKLYVG ILDNQGNDIK SQTKVGLNDW IKVSKDWQLA | 360 |
KIPLKRFTDK GKAWDANKSA EVAKDIKWDK IQEIRFSVGK GENAGEPGKP APVTVFVDQI | 420 |
TFTSNIDWVD PDLKWDSFKS NAPDYVISDF EGKFAKDKWE PSTGPKSQLK FKVENCAEFK | 480 |
SNCLNIEHYL LADWVDVVLD MQKNGRPAAD RDWTKHWGIM FDVYSEKAWQ SITVQVQDAG | 540 |
NEIFVSNVGA PKGKTTILVP FRTFGKFPYY QPPNAVENGL FDLKGVTALD FKPSGEGTAG | 600 |
GFKVDNIRLT NQREVKAKER PAVIKVLVKG EKDVLNPNIS GGLFGINAAL WDGDMLDNKN | 660 |
FKVQTREYAK RINHGIIRYP GGLRADDDHW KEILDNHDWM VDTDEFLEWL KKTGSNAMFT | 720 |
VNFGSGTEKE AADWVKHTNI DKKAGILYWE IGNEIYGNWH PYYEKYGKDG GTIYGKRARK | 780 |
FIEAMKKVDP TIKVAVLGVL EGDWNDKVLA ETGDIADGLI VHHYPQHFGE ENDFAMLSAP | 840 |
QTLTAIYERL HKVVDKWTKK YNKDKKIELW LTEWNSVDFN PGPQTLSVEN GLFVADYLGM | 900 |
LATENVDNAQ YWDIHNDITP EGGDYGYLTR SGEECMNCPR PSYWAFQMAS DALRGKLMKT | 960 |
TIKGDEDALL TAYWTVNGNK KQLLLVNKSP YSEFDIKLDI PGFKGKAKVQ TLDKTSEKLK | 1020 |
EGWANDPSKK AKTVDISKGI KVGKRTLTLI TLE | 1053 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.