CAZyme3D

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Entry ID

Information for CAZyme ID: BAA10965.1

Basic Information

GenBank IDBAA10965.1
FamilyCBM11, CBM30, GH51
Sequence Length1053
UniProt IDP71329(100,100)Download
Average pLDDT?89.08
CAZy50 ID11803
CAZy50 RepNo, AIF25916.1
Structure Cluster-
EC Number(s)3.2.1.4
Substrates(s)beta-glucan

Taxonomy

Tax ID59374
KingdomBacteria
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIKQSLKVAS  LAVLGLSVTA  AMAQPKRPHL  AVYKFFDEQY  RPGGYDYSYG  GTSKGVTITK60
SGGYKSKAAL  NIKLDPKEYS  GASICLYNEF  FDLNKYMLDS  KVEFMIKGKN  GGESVKVGLL120
DEEVSDGKKT  QVVLPMNKYI  EGGAVTTDWK  KVSIPLVDFP  DRGLYWDNTR  KSEFPSRIDW180
DKIAEIRFSI  DKSAASEFEV  WVDNIEIVKG  NKKAAPKKQM  VYWDENNDII  DGPKNPEKLD240
GKAKTLATFY  DNQVKGFSYS  YGGLTAQREA  QSKTPGNKNV  LAMYIDNNDW  SGVTYSLGEG300
KFIDLSKVRD  KGGLYFWIKG  KLGGEKLYVG  ILDNQGNDIK  SQTKVGLNDW  IKVSKDWQLA360
KIPLKRFTDK  GKAWDANKSA  EVAKDIKWDK  IQEIRFSVGK  GENAGEPGKP  APVTVFVDQI420
TFTSNIDWVD  PDLKWDSFKS  NAPDYVISDF  EGKFAKDKWE  PSTGPKSQLK  FKVENCAEFK480
SNCLNIEHYL  LADWVDVVLD  MQKNGRPAAD  RDWTKHWGIM  FDVYSEKAWQ  SITVQVQDAG540
NEIFVSNVGA  PKGKTTILVP  FRTFGKFPYY  QPPNAVENGL  FDLKGVTALD  FKPSGEGTAG600
GFKVDNIRLT  NQREVKAKER  PAVIKVLVKG  EKDVLNPNIS  GGLFGINAAL  WDGDMLDNKN660
FKVQTREYAK  RINHGIIRYP  GGLRADDDHW  KEILDNHDWM  VDTDEFLEWL  KKTGSNAMFT720
VNFGSGTEKE  AADWVKHTNI  DKKAGILYWE  IGNEIYGNWH  PYYEKYGKDG  GTIYGKRARK780
FIEAMKKVDP  TIKVAVLGVL  EGDWNDKVLA  ETGDIADGLI  VHHYPQHFGE  ENDFAMLSAP840
QTLTAIYERL  HKVVDKWTKK  YNKDKKIELW  LTEWNSVDFN  PGPQTLSVEN  GLFVADYLGM900
LATENVDNAQ  YWDIHNDITP  EGGDYGYLTR  SGEECMNCPR  PSYWAFQMAS  DALRGKLMKT960
TIKGDEDALL  TAYWTVNGNK  KQLLLVNKSP  YSEFDIKLDI  PGFKGKAKVQ  TLDKTSEKLK1020
EGWANDPSKK  AKTVDISKGI  KVGKRTLTLI  TLE1053

Predicted 3D structure by AlphaFold2 with pLDDT = 89.08 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM11(47-208)+CBM11(250-404)+CBM11(447-611)+GH51(648-1020)

MIKQSLKVAS  LAVLGLSVTA  AMAQPKRPHL  AVYKFFDEQY  RPGGYDYSYG  GTSKGVTITK60
SGGYKSKAAL  NIKLDPKEYS  GASICLYNEF  FDLNKYMLDS  KVEFMIKGKN  GGESVKVGLL120
DEEVSDGKKT  QVVLPMNKYI  EGGAVTTDWK  KVSIPLVDFP  DRGLYWDNTR  KSEFPSRIDW180
DKIAEIRFSI  DKSAASEFEV  WVDNIEIVKG  NKKAAPKKQM  VYWDENNDII  DGPKNPEKLD240
GKAKTLATFY  DNQVKGFSYS  YGGLTAQREA  QSKTPGNKNV  LAMYIDNNDW  SGVTYSLGEG300
KFIDLSKVRD  KGGLYFWIKG  KLGGEKLYVG  ILDNQGNDIK  SQTKVGLNDW  IKVSKDWQLA360
KIPLKRFTDK  GKAWDANKSA  EVAKDIKWDK  IQEIRFSVGK  GENAGEPGKP  APVTVFVDQI420
TFTSNIDWVD  PDLKWDSFKS  NAPDYVISDF  EGKFAKDKWE  PSTGPKSQLK  FKVENCAEFK480
SNCLNIEHYL  LADWVDVVLD  MQKNGRPAAD  RDWTKHWGIM  FDVYSEKAWQ  SITVQVQDAG540
NEIFVSNVGA  PKGKTTILVP  FRTFGKFPYY  QPPNAVENGL  FDLKGVTALD  FKPSGEGTAG600
GFKVDNIRLT  NQREVKAKER  PAVIKVLVKG  EKDVLNPNIS  GGLFGINAAL  WDGDMLDNKN660
FKVQTREYAK  RINHGIIRYP  GGLRADDDHW  KEILDNHDWM  VDTDEFLEWL  KKTGSNAMFT720
VNFGSGTEKE  AADWVKHTNI  DKKAGILYWE  IGNEIYGNWH  PYYEKYGKDG  GTIYGKRARK780
FIEAMKKVDP  TIKVAVLGVL  EGDWNDKVLA  ETGDIADGLI  VHHYPQHFGE  ENDFAMLSAP840
QTLTAIYERL  HKVVDKWTKK  YNKDKKIELW  LTEWNSVDFN  PGPQTLSVEN  GLFVADYLGM900
LATENVDNAQ  YWDIHNDITP  EGGDYGYLTR  SGEECMNCPR  PSYWAFQMAS  DALRGKLMKT960
TIKGDEDALL  TAYWTVNGNK  KQLLLVNKSP  YSEFDIKLDI  PGFKGKAKVQ  TLDKTSEKLK1020
EGWANDPSKK  AKTVDISKGI  KVGKRTLTLI  TLE1053

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help