Information for CAZyme ID: AZZ99244.1
Basic Information
| GenBank ID | AZZ99244.1 |
| Family | CBM6 |
| Sequence Length | 551 |
| UniProt ID | A0A451F7A3(100,100) |
| Average pLDDT? | 91.35 |
| CAZy50 ID | 58579 |
| CAZy50 Rep | No, AZQ83857.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1709477 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas sp. R3 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKITLPCSTL ILLTICAPTL AGNSPSPIEP IMVTLPAGSF AMGSPDNENS RPVHTVTLPE | 60 |
| FSLGKYEVTV REYRRFVEAT GFVAPQECYH QLDSWFIGNT PGSWDNNSLT DNDFQPAICV | 120 |
| SWAGAKAYVD WLAKTTGKPY RLPSEAEWEY AARGGATSRF YFGDDPKHPS VCQYENTADL | 180 |
| SGENELQRTT NSTYVNFVDG FADCVDHATF ASVVGMYQPN PYGLHDMLSN VAELQGDCYQ | 240 |
| DNYQQASENG RAFQSEQCER RSVRGSSWHW NIWPVTRRGS MPEDFAGAAE GFRVALDGPA | 300 |
| PKQSKVSRRF QQQLVMAQKQ EQRRRDQQFA YPQPVTNLTL SQSNGYATLN WDRSTQKDIS | 360 |
| GYRIYRNHSA GSMFELIADN VIDTQFTDAN ASPNVYEYTV VAVRRNLQSN YSNLVTTSGK | 420 |
| ALSVPGRIEA EYAYAVTGAN TARTSDTDGR LNLTGGDGIA EDAQLDYQIN VSKSGYYRLS | 480 |
| YRIAGPRDGK GFTVKIDDKP ISAHTVRGTG GYHDWQTQQG ERIYLAAGKH TLKLHSHDTN | 540 |
| WKLNWLALHQ E | 551 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.35 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM6(439-549)
| MKITLPCSTL ILLTICAPTL AGNSPSPIEP IMVTLPAGSF AMGSPDNENS RPVHTVTLPE | 60 |
| FSLGKYEVTV REYRRFVEAT GFVAPQECYH QLDSWFIGNT PGSWDNNSLT DNDFQPAICV | 120 |
| SWAGAKAYVD WLAKTTGKPY RLPSEAEWEY AARGGATSRF YFGDDPKHPS VCQYENTADL | 180 |
| SGENELQRTT NSTYVNFVDG FADCVDHATF ASVVGMYQPN PYGLHDMLSN VAELQGDCYQ | 240 |
| DNYQQASENG RAFQSEQCER RSVRGSSWHW NIWPVTRRGS MPEDFAGAAE GFRVALDGPA | 300 |
| PKQSKVSRRF QQQLVMAQKQ EQRRRDQQFA YPQPVTNLTL SQSNGYATLN WDRSTQKDIS | 360 |
| GYRIYRNHSA GSMFELIADN VIDTQFTDAN ASPNVYEYTV VAVRRNLQSN YSNLVTTSGK | 420 |
| ALSVPGRIEA EYAYAVTGAN TARTSDTDGR LNLTGGDGIA EDAQLDYQIN VSKSGYYRLS | 480 |
| YRIAGPRDGK GFTVKIDDKP ISAHTVRGTG GYHDWQTQQG ERIYLAAGKH TLKLHSHDTN | 540 |
| WKLNWLALHQ E | 551 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.