CAZyme3D

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Entry ID

Information for CAZyme ID: AZQ56190.1

Basic Information

GenBank IDAZQ56190.1
FamilyGT51
Sequence Length747
UniProt IDA0A3S9NKG9(100,100)Download
Average pLDDT?83.64
CAZy50 ID11681
CAZy50 RepNo, AIO53918.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID95486
KingdomBacteria
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cenocepacia

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIDLALPRPA  RFAGRVFVAV  ALAVPLVAHA  LPGYDDVRRN  WRSSDWVLLA  RDGTPLQRTR60
IDLTERRGDW  VSLADVSPAF  REAIVVSEDK  RFYEHSGVDW  RGIAGAAWGN  LWNERTRGAS120
TVTMQLAGLL  SDSPRRSGQR  SLPQKATQAV  NALWLERSWR  KDQILEAYLN  LVPFRGETIG180
LGALSQVLFG  KAPSGLDARE  AAIAAALVRA  PNAAPAKIAE  RACRILRDMQ  AAQACASLDG240
YVQLVTARPA  NAVRDDDGAA  LAPHFARRIA  AEVKPAAGAQ  IRTTLDAPLQ  RFARDTLMRA300
LTELNAPAHR  RNVQDGAVVV  IDNATGEIRA  WVGSSGALSS  ARDVDAVLAP  RQAGSTLKPF360
LYAQAIDEKR  LTAASLLDDA  PINLAAGGGL  YIPQNYDKDF  KGWVSVRSAL  GGSLNVPAVR420
TLVLVTPHRF  ARTLTALGLP  LAQEGDYYGF  SLALGSADVT  LLSLTNAYRA  LANGGVARKV480
VDLPATAPTP  ASGASALARD  AGTRVFSEAA  SFVVTDILSD  NNARVRTFGF  DNPLATRFFS540
AVKTGTSKDM  RDNWTMGFTS  RYTVGVWVGN  ADGSPMWDVS  GVTGASPVWS  AVVGYLHRDL600
PSRAPRAPAG  VETRRIAFER  DIEPARNEWF  IAGTAVDTIR  LAAPVTPGKD  GARAPLTIGA660
PTDGTIFAID  PDIPPKNQRI  WFERSAGRAT  KFAWRLDDKV  IGRADRVAWL  PWPGRHRLEL720
VDARGNVADA  IGFEVRGAFA  KPAARKP747

Predicted 3D structure by AlphaFold2 with pLDDT = 83.64 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(64-229)

MIDLALPRPA  RFAGRVFVAV  ALAVPLVAHA  LPGYDDVRRN  WRSSDWVLLA  RDGTPLQRTR60
IDLTERRGDW  VSLADVSPAF  REAIVVSEDK  RFYEHSGVDW  RGIAGAAWGN  LWNERTRGAS120
TVTMQLAGLL  SDSPRRSGQR  SLPQKATQAV  NALWLERSWR  KDQILEAYLN  LVPFRGETIG180
LGALSQVLFG  KAPSGLDARE  AAIAAALVRA  PNAAPAKIAE  RACRILRDMQ  AAQACASLDG240
YVQLVTARPA  NAVRDDDGAA  LAPHFARRIA  AEVKPAAGAQ  IRTTLDAPLQ  RFARDTLMRA300
LTELNAPAHR  RNVQDGAVVV  IDNATGEIRA  WVGSSGALSS  ARDVDAVLAP  RQAGSTLKPF360
LYAQAIDEKR  LTAASLLDDA  PINLAAGGGL  YIPQNYDKDF  KGWVSVRSAL  GGSLNVPAVR420
TLVLVTPHRF  ARTLTALGLP  LAQEGDYYGF  SLALGSADVT  LLSLTNAYRA  LANGGVARKV480
VDLPATAPTP  ASGASALARD  AGTRVFSEAA  SFVVTDILSD  NNARVRTFGF  DNPLATRFFS540
AVKTGTSKDM  RDNWTMGFTS  RYTVGVWVGN  ADGSPMWDVS  GVTGASPVWS  AVVGYLHRDL600
PSRAPRAPAG  VETRRIAFER  DIEPARNEWF  IAGTAVDTIR  LAAPVTPGKD  GARAPLTIGA660
PTDGTIFAID  PDIPPKNQRI  WFERSAGRAT  KFAWRLDDKV  IGRADRVAWL  PWPGRHRLEL720
VDARGNVADA  IGFEVRGAFA  KPAARKP747

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help