CAZyme3D

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Entry ID

Information for CAZyme ID: AZQ38304.1

Basic Information

GenBank IDAZQ38304.1
FamilyPL4_1
Sequence Length555
UniProt IDA0A3S9MGJ3(100,100)Download
Average pLDDT?93.19
CAZy50 ID55560
CAZy50 RepNo, AXG76381.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2496836
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces cyaneochromogenes

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSGSANRPVR  RRTFVLGAAA  AAGTAALSGT  ASAAAFGWSD  DGSNYVVDTG  ANLVFKVSKT60
NGDLTSLVYR  GTEYQGYGGK  NSHIESGLGT  STVSIRQSGS  TILISVAYGT  LRHYYAARSG120
ENNIYLWTNR  ADTSVASTRF  ILRVKAGLFL  NDEPDSYTYA  PTAIEASDVF  AKSDGQTRSK180
HYSKLRVSDY  DYVGWSAGGV  GLWIVRSNHE  KASGGPFYRS  LLRHQSADGG  GLYEILHYAQ240
NQTENERFGL  QGPYVIALTD  GGAPSSSLFP  GTLTTSWADS  LGISGYVPAS  GRGRVAGVGI300
TGRNTAYPYT  VGLANSAAQY  WGSARSSDGY  FSVTGILPGT  YTLTVFKSEL  AVYTTSVTVT360
AGGTTTLNSI  AIPSTNDPSG  ASAIWRINDW  TGTPSGFKNA  DLMTYAHPSD  VRAAAWTGNV420
VIGSGSETSA  FPCYLWKGVN  SGLLVYFRLT  AAQAAAAHTL  RIGVTTAYAN  GRPQVVVNDT480
WTSAIPSPPT  QPSTRSLTNG  SYRGNNHTFT  YSVPASAWRT  DTSQYNVLKI  NVVSGSGSTG540
YLSAGTAIDA  IDLLA555

Predicted 3D structure by AlphaFold2 with pLDDT = 93.19 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL4_1(33-543)

MSGSANRPVR  RRTFVLGAAA  AAGTAALSGT  ASAAAFGWSD  DGSNYVVDTG  ANLVFKVSKT60
NGDLTSLVYR  GTEYQGYGGK  NSHIESGLGT  STVSIRQSGS  TILISVAYGT  LRHYYAARSG120
ENNIYLWTNR  ADTSVASTRF  ILRVKAGLFL  NDEPDSYTYA  PTAIEASDVF  AKSDGQTRSK180
HYSKLRVSDY  DYVGWSAGGV  GLWIVRSNHE  KASGGPFYRS  LLRHQSADGG  GLYEILHYAQ240
NQTENERFGL  QGPYVIALTD  GGAPSSSLFP  GTLTTSWADS  LGISGYVPAS  GRGRVAGVGI300
TGRNTAYPYT  VGLANSAAQY  WGSARSSDGY  FSVTGILPGT  YTLTVFKSEL  AVYTTSVTVT360
AGGTTTLNSI  AIPSTNDPSG  ASAIWRINDW  TGTPSGFKNA  DLMTYAHPSD  VRAAAWTGNV420
VIGSGSETSA  FPCYLWKGVN  SGLLVYFRLT  AAQAAAAHTL  RIGVTTAYAN  GRPQVVVNDT480
WTSAIPSPPT  QPSTRSLTNG  SYRGNNHTFT  YSVPASAWRT  DTSQYNVLKI  NVVSGSGSTG540
YLSAGTAIDA  IDLLA555

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help