CAZyme3D

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Entry ID

Information for CAZyme ID: AZN40777.1

Basic Information

GenBank IDAZN40777.1
FamilyGH73
Sequence Length248
UniProt IDA0A3Q8X6F7(100,100)Download
Average pLDDT?91.23
CAZy50 ID170455
CAZy50 RepNo, QHT60586.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2495582
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus albus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MDKPSFFAKL  IPIARQLYLE  GSPIYPSVRL  AQCWLETGGN  IPYWNNLAGY  KVGSGVPNGY60
WKGAVVNKQT  WEVINGKRVD  VVAAFRAYDN  LYDFFKDQDL  LFARSLYTRV  REAKGPFEQA120
QMLLECGYAT  DPSYAKQIIA  IINGSQLTQY  DSKNGGDEPM  TAEEKKAFQD  LTDQVTKLSA180
TLNAQTAAVT  ALQAQTAQIQ  AHDQLDVIPA  WAKDAVDAAI  KAKLIDTSAG  GSYDFYRLLT240
VLHRKKLI248

Predicted 3D structure by AlphaFold2 with pLDDT = 91.23 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH73(23-147)

MDKPSFFAKL  IPIARQLYLE  GSPIYPSVRL  AQCWLETGGN  IPYWNNLAGY  KVGSGVPNGY60
WKGAVVNKQT  WEVINGKRVD  VVAAFRAYDN  LYDFFKDQDL  LFARSLYTRV  REAKGPFEQA120
QMLLECGYAT  DPSYAKQIIA  IINGSQLTQY  DSKNGGDEPM  TAEEKKAFQD  LTDQVTKLSA180
TLNAQTAAVT  ALQAQTAQIQ  AHDQLDVIPA  WAKDAVDAAI  KAKLIDTSAG  GSYDFYRLLT240
VLHRKKLI248

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help