CAZyme3D

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Entry ID

Information for CAZyme ID: AZH29901.1

Basic Information

GenBank IDAZH29901.1
FamilyCBM26, GH13_42
Sequence Length949
UniProt IDA0A3G8R7Q9(100,100)Download
Average pLDDT?87.87
CAZy50 ID7973
CAZy50 RepNo, AIQ62238.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2487928
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. M-152

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLRKKTGSFI  SWLIILSLCL  NFFGLPGGAS  ASNTDHTAAY  TNSTVNVLPL  PTAAVTSTVT60
ATYAPTASPA  STQNGLTVHF  KKPASWNSAI  RIHYWNLNPA  TVPISGAWPG  ILMKSDGNDW120
YSYTIAEATG  SSLIFNDSSG  KQTADLSRSV  KDGWYYTDNV  WYDANPETPK  VPVVSISPEP180
KTYDSAQMVT  LSSTNSGNKI  YYTIDGSTPT  TSSTLYTTPI  KVASSLTIKA  IAVNSIGQTG240
NASSFDYVID  LNADLQAPTI  TANLPAGHSG  SSVTVSFNLK  DNKAATTKAY  YTEDGTEPTT300
SSKVYIHGNA  LAGLTGPSIL  ISKTTTLKFL  IIDGAGNQTK  QSFVYNIGDK  GDFREDTIYF360
VITSRFYDGD  PSNNVHAWDD  TKARNPDSDP  AWRGDFKGLI  QKLDYIKALG  FSAIWITPVV420
QNASGYDYHG  YHAINFAKVD  PRYESAGASY  QDLINAAHAK  GLKVIQDIVV  NHTGNFGEEN480
LYPMFKKDSA  KPDTGNNLVK  TTDKLPSNYD  SMTPDQQYQA  RLALMKTAET  NNNIYHTEKS540
LSWESYTVQT  GQIAGDCVDL  NTENPTVNKY  LIDTYNHYID  MGVDAFRVDT  VKHVSRYIFN600
KYYIPAWKTR  GGSDFYVFGE  VATRYRDVWN  SGIPAISTPF  YTWKASKSYP  GDGKNDYASN660
KMSVEQEWAD  NSTTAGQPTS  NNAFLIGNTY  HTPDYSMKSG  MDVIDFPMHW  AFKTAHEAFN720
MRSGDQYYND  ATWNVTYVDS  HDYAPDQAPE  NQRFAGTQDT  WAENLDLMFT  FRGIPAIFYG780
SEIEFQKGAV  IDPGPNAPLS  KTGRAYYGDH  IEGSVMVQDY  GKYTNATGTL  AESLSHPLAK840
HIRQLNLIRR  AVPALQKGQY  STENVTGNLA  FKRRYTDSAK  GIDSFALVTI  SGNATFSGIP900
NGTYVDAVTG  DSKKVTDGKI  TLTCSGKGNA  RVYVLNGSGG  IGETGTYLK949

Predicted 3D structure by AlphaFold2 with pLDDT = 87.87 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM26(77-147)+CBM56(189-251)+GH13_42(393-788)

MLRKKTGSFI  SWLIILSLCL  NFFGLPGGAS  ASNTDHTAAY  TNSTVNVLPL  PTAAVTSTVT60
ATYAPTASPA  STQNGLTVHF  KKPASWNSAI  RIHYWNLNPA  TVPISGAWPG  ILMKSDGNDW120
YSYTIAEATG  SSLIFNDSSG  KQTADLSRSV  KDGWYYTDNV  WYDANPETPK  VPVVSISPEP180
KTYDSAQMVT  LSSTNSGNKI  YYTIDGSTPT  TSSTLYTTPI  KVASSLTIKA  IAVNSIGQTG240
NASSFDYVID  LNADLQAPTI  TANLPAGHSG  SSVTVSFNLK  DNKAATTKAY  YTEDGTEPTT300
SSKVYIHGNA  LAGLTGPSIL  ISKTTTLKFL  IIDGAGNQTK  QSFVYNIGDK  GDFREDTIYF360
VITSRFYDGD  PSNNVHAWDD  TKARNPDSDP  AWRGDFKGLI  QKLDYIKALG  FSAIWITPVV420
QNASGYDYHG  YHAINFAKVD  PRYESAGASY  QDLINAAHAK  GLKVIQDIVV  NHTGNFGEEN480
LYPMFKKDSA  KPDTGNNLVK  TTDKLPSNYD  SMTPDQQYQA  RLALMKTAET  NNNIYHTEKS540
LSWESYTVQT  GQIAGDCVDL  NTENPTVNKY  LIDTYNHYID  MGVDAFRVDT  VKHVSRYIFN600
KYYIPAWKTR  GGSDFYVFGE  VATRYRDVWN  SGIPAISTPF  YTWKASKSYP  GDGKNDYASN660
KMSVEQEWAD  NSTTAGQPTS  NNAFLIGNTY  HTPDYSMKSG  MDVIDFPMHW  AFKTAHEAFN720
MRSGDQYYND  ATWNVTYVDS  HDYAPDQAPE  NQRFAGTQDT  WAENLDLMFT  FRGIPAIFYG780
SEIEFQKGAV  IDPGPNAPLS  KTGRAYYGDH  IEGSVMVQDY  GKYTNATGTL  AESLSHPLAK840
HIRQLNLIRR  AVPALQKGQY  STENVTGNLA  FKRRYTDSAK  GIDSFALVTI  SGNATFSGIP900
NGTYVDAVTG  DSKKVTDGKI  TLTCSGKGNA  RVYVLNGSGG  IGETGTYLK949

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help