CAZyme3D

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Entry ID

Information for CAZyme ID: AZF79163.1

Basic Information

GenBank IDAZF79163.1
FamilyGT5
Sequence Length566
UniProt IDA0A0E3MD55(100,100)Download
Average pLDDT?94.78
CAZy50 ID56635
CAZy50 RepNo, QGR19082.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2287
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSaccharolobus
SpeciesSaccharolobus solfataricus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRIESLWLP  EDIKKVWMIT  FELQKIASVG  GLGNAVYNIA  KHLAEKGVDI  TVFLPSHGRH60
LNEYYRSLLS  LRHIDMIVEG  RRKGIDNNYY  NYKIGFEEGK  IDNFKVILVK  GLDYNTGRVL120
DSWNIYDNTM  EKISLLTRGL  EGFTLGNLSN  LPDIIHAQDW  HAVIPAVRIK  QLLEERRIIV180
PFIYTIHLLN  YIGVPWHYAS  QDWSGIEDCW  HYIWMVAKHE  LYKYSYVWDV  LSGGKIEKFG240
CYEADMVSSV  SYSYLSFDVF  NFVGNWVANK  SCVTYNGTDW  DVEEIQNKAV  TMYGTKDRRE300
LRRRLLSSLH  SLRVIPEDYT  TGNMLWNNRN  RLGLRDDWTY  DDLGEGPLVL  FTGRLVYQKG360
VDLLLRAMKT  VVNEINNARL  LIFGLPSGDY  NLLWDIIERA  SEIKDNIRLI  VGRMDLDLYK420
LFHYVSSVFV  IPSRWEPFGI  NSIEAMAMGL  PVIAYSVGGL  RETVVDIRED  KNNATGLLIK480
PESIDELARA  IRIALYLSEA  SELNKSDLLY  KASEVKVDDT  RYWDKVRENA  ITRVKSRFRW540
DAVINSLTEC  YRKTLDMAKY  RALASF566

Predicted 3D structure by AlphaFold2 with pLDDT = 94.78 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT5(15-553)

MKRIESLWLP  EDIKKVWMIT  FELQKIASVG  GLGNAVYNIA  KHLAEKGVDI  TVFLPSHGRH60
LNEYYRSLLS  LRHIDMIVEG  RRKGIDNNYY  NYKIGFEEGK  IDNFKVILVK  GLDYNTGRVL120
DSWNIYDNTM  EKISLLTRGL  EGFTLGNLSN  LPDIIHAQDW  HAVIPAVRIK  QLLEERRIIV180
PFIYTIHLLN  YIGVPWHYAS  QDWSGIEDCW  HYIWMVAKHE  LYKYSYVWDV  LSGGKIEKFG240
CYEADMVSSV  SYSYLSFDVF  NFVGNWVANK  SCVTYNGTDW  DVEEIQNKAV  TMYGTKDRRE300
LRRRLLSSLH  SLRVIPEDYT  TGNMLWNNRN  RLGLRDDWTY  DDLGEGPLVL  FTGRLVYQKG360
VDLLLRAMKT  VVNEINNARL  LIFGLPSGDY  NLLWDIIERA  SEIKDNIRLI  VGRMDLDLYK420
LFHYVSSVFV  IPSRWEPFGI  NSIEAMAMGL  PVIAYSVGGL  RETVVDIRED  KNNATGLLIK480
PESIDELARA  IRIALYLSEA  SELNKSDLLY  KASEVKVDDT  RYWDKVRENA  ITRVKSRFRW540
DAVINSLTEC  YRKTLDMAKY  RALASF566

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help