CAZyme3D

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Entry ID

Information for CAZyme ID: AZA55427.1

Basic Information

GenBank IDAZA55427.1
FamilyCE12
Sequence Length440
UniProt IDA0A3G6MK41(100,100)Download
Average pLDDT?93.70
CAZy50 ID70183
CAZy50 RepNo, CAD0219641.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2487065
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp. G0201

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKGTGFLML  FICSLMFAQQ  TTFKFDFGGE  RAENGFIPIT  STSKFDKKIG  YGFMDISNLK60
SVDNGGNTLT  GDYITSDKPF  YFSVAIPEGN  YDIKLTLGDS  KGTSETTIRV  ENRRLMLDDV120
KTKEKEIIEK  SITVHVKDSI  IRNQNGTQIG  IVKLKPRETK  YLHWDNLFTI  EFNNKAPKVC180
ALIIQPNKTA  KTIYITGDST  VVDAQYEPWA  SWGQMLPYFF  VPKEVVIANY  AESGETLKAF240
EDRHRIDKIW  NKIKPGDYLF  IQFGHNDQKY  GNSTKSGYRK  RLQEWILKAK  QLGAIPVLVT300
SMNRHVFDEN  NKIVNTLDDF  PSAMREISKE  ENVYLIDLNA  MSKMLFEAMG  PENSKKAFVY360
YPANSYPNQP  NALADDTHFN  TYGAYELAKC  VVKSIVDQKL  PLSKFVSKNY  KGFDLNKPDA420
VEKFHWPESI  FMESLKPDGN  440

Predicted 3D structure by AlphaFold2 with pLDDT = 93.70 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE12(192-395)

MKKGTGFLML  FICSLMFAQQ  TTFKFDFGGE  RAENGFIPIT  STSKFDKKIG  YGFMDISNLK60
SVDNGGNTLT  GDYITSDKPF  YFSVAIPEGN  YDIKLTLGDS  KGTSETTIRV  ENRRLMLDDV120
KTKEKEIIEK  SITVHVKDSI  IRNQNGTQIG  IVKLKPRETK  YLHWDNLFTI  EFNNKAPKVC180
ALIIQPNKTA  KTIYITGDST  VVDAQYEPWA  SWGQMLPYFF  VPKEVVIANY  AESGETLKAF240
EDRHRIDKIW  NKIKPGDYLF  IQFGHNDQKY  GNSTKSGYRK  RLQEWILKAK  QLGAIPVLVT300
SMNRHVFDEN  NKIVNTLDDF  PSAMREISKE  ENVYLIDLNA  MSKMLFEAMG  PENSKKAFVY360
YPANSYPNQP  NALADDTHFN  TYGAYELAKC  VVKSIVDQKL  PLSKFVSKNY  KGFDLNKPDA420
VEKFHWPESI  FMESLKPDGN  440

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help