CAZyme3D

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Entry ID

Information for CAZyme ID: AYY30305.1

Basic Information

GenBank IDAYY30305.1
FamilyCE4
Sequence Length260
UniProt IDA0A3G5UKL5(100,100)Download
Average pLDDT?91.01
CAZy50 ID158530
CAZy50 RepNo, UAL52875.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2576356
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus sp. FDAARGOS_527

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKYKWLYIGL  IFSIMMALVP  VSALAYTNTP  HNWGIPRPKN  ETVPDAGKLY  TDLLQKNGGF60
YLGDTKKKDI  YLTFDNGYEN  GYTGKILDVL  KEKKVPATFF  VTGHYIKTQK  DLLLRMKDEG120
HIIGNHSWSH  PDFTAVNDEK  LREELTSVTE  EIKKVTGQKE  VKYVRPPRGV  FSERTLALTK180
EMGYYNVFWS  LAFLDWKVDQ  QRGWQYAHNN  VMTMIHPGSI  LLLHAISKDN  AEALAKIIDD240
LREKGYHFKS  LDDLVKSNQP  260

Predicted 3D structure by AlphaFold2 with pLDDT = 91.01 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(61-184)

MKYKWLYIGL  IFSIMMALVP  VSALAYTNTP  HNWGIPRPKN  ETVPDAGKLY  TDLLQKNGGF60
YLGDTKKKDI  YLTFDNGYEN  GYTGKILDVL  KEKKVPATFF  VTGHYIKTQK  DLLLRMKDEG120
HIIGNHSWSH  PDFTAVNDEK  LREELTSVTE  EIKKVTGQKE  VKYVRPPRGV  FSERTLALTK180
EMGYYNVFWS  LAFLDWKVDQ  QRGWQYAHNN  VMTMIHPGSI  LLLHAISKDN  AEALAKIIDD240
LREKGYHFKS  LDDLVKSNQP  260

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help