CAZyme3D

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Entry ID

Information for CAZyme ID: AYV25596.1

Basic Information

GenBank IDAYV25596.1
FamilyCE4
Sequence Length302
UniProt IDA0A3G4VLA3(100,100)Download
Average pLDDT?97.11
CAZy50 ID35812
CAZy50 RepNo, QXC61059.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1522758
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. ADI95-16

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSEHPRDLAG  YGAEPPHAAW  PGGARVAVSL  VLNYEEGGEQ  SVLEGDPASE  GFLHELVGAP60
PVVGGRDLNV  ESMFAYGSRA  GFWRVHRTLL  AHGAPLTVYA  VARALELNPD  AARAMGTAGW120
EVASHGRRWI  DYRHVPQDTE  RADIAYSIAT  IERLTGRRPV  GWYTGRTSPH  TRRLVAAEGG180
FLYDSDDYSD  DLPFYVEAAG  RPHLVVPYSL  DANDCKFLLV  HGFTTADDML  TYLIDTFDAL240
HAEGGDRPRM  MSVGLHCRII  GRPGRIRALD  GFLKHVAQRG  GAWIATREQI  ARHWLAAHPP300
RR302

Predicted 3D structure by AlphaFold2 with pLDDT = 97.11 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(79-183)

MSEHPRDLAG  YGAEPPHAAW  PGGARVAVSL  VLNYEEGGEQ  SVLEGDPASE  GFLHELVGAP60
PVVGGRDLNV  ESMFAYGSRA  GFWRVHRTLL  AHGAPLTVYA  VARALELNPD  AARAMGTAGW120
EVASHGRRWI  DYRHVPQDTE  RADIAYSIAT  IERLTGRRPV  GWYTGRTSPH  TRRLVAAEGG180
FLYDSDDYSD  DLPFYVEAAG  RPHLVVPYSL  DANDCKFLLV  HGFTTADDML  TYLIDTFDAL240
HAEGGDRPRM  MSVGLHCRII  GRPGRIRALD  GFLKHVAQRG  GAWIATREQI  ARHWLAAHPP300
RR302

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help