CAZyme3D

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Entry ID

Information for CAZyme ID: AYQ73951.1

Basic Information

GenBank IDAYQ73951.1
FamilyCBM22, CBM9, GH10
Sequence Length1082
UniProt IDA0A3G3K1B8(100,100)Download
Average pLDDT?89.74
CAZy50 ID3306
CAZy50 RepNo, AEI43097.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2674991
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusCohnella
SpeciesCohnella candidum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRRRIKQAIS  SLLAAALLGP  ALWLTPVAQA  ETDPTETVTV  YHEAFAGGQG  AATPSGGASL60
TAVTGKAFDG  NADGAALYVS  NRVNNWDAVD  FRFADLGLQN  GKTYTVTLTG  YVDAGVTVPA120
GAQTWLQTVN  GYGWLAGADF  AAGSAFTMTK  EFTVDTSKDS  ALRVQSNDAG  AGVPFYIGDI180
LITEKTASGG  GGSNDRPPAL  PFNTITFEDQ  TAGGFAGRAG  TETLTVTNEA  NHTAGGSYSL240
KVENRTAAWH  GPSLRIEKYV  DLGFEYTLSV  WVKLLSPDSS  QLQLSTQIGD  GSSASYNNVL300
GKTITTADGW  VLYQGTYRYN  NAGGEYLTLY  VESSNNGTAS  YYIDDVSLVR  GSGPIGIQKD360
LIPIKDAYQN  DFLIGNAVSS  ADLDGVRLEL  LKMHHNAVTA  ENTMKPDSLQ  PTKGDFTFDG420
ADAIVDKARA  EGLNVHGHVL  VWHQQTPAWM  NTAQDAQNNT  VPLGRDEALG  NMRTHIRTVM480
EHFGSKVISW  DVVNEAMNDN  PANPSDWQSA  LRRSPWYQAV  GPDYVEQAFL  AAREVLNDHP540
DWDIKLYYND  YNDDNQNKAQ  AIYSMVKALN  DKYAETHPGK  KLIDGIGMQG  HYNINTNPDN600
VKLSLEKFIS  LGVEVSVSEL  DVQAGSNGQL  TEKQAVAQGY  LYAQLFKLYK  AHADHIARVT660
FWGLNDATSW  RAESSPLPFD  KNLQAKPAYY  GILDPDKFIA  EHPPESTQAN  QATAGFATPV720
VDGTVDAVWS  RTPEMPINRY  QTAWQGAAGT  AKALWDNQNL  YVLIQVSDAQ  LDKGSLNPWE780
QDSVEIFVDQ  NNAKTSFYQD  DDGQYRVNFD  NETSFNPPAL  ADGFVSATHV  NGMNYTVEVK840
IPLKSVTPAN  GLKLGFDVQI  NDAKDGARQS  VAAWNDTTGT  GYMDTSVYGE  LTLKAPPAAP900
TDLTLTAASS  TSIALDWSYA  SGAPVTFSVF  RATAADGPFT  EAAANLNDSA  FTDTNLQPDT960
KYYYYVKASD  GTTVSQPSLT  VSGRTLLAPV  GHLAAAALNH  QVIRLDWDRI  QPAAAYAVYR1020
STAADGPYTK  IADRLSASQY  VDNQLEPSTI  YYYKVVAIAG  NNRSEAASAQ  AATPAKPGKP1080
QR1082

Predicted 3D structure by AlphaFold2 with pLDDT = 89.74 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM22(40-160)+CBM22(205-333)+GH10(364-694)+CBM9(721-893)

MRRRIKQAIS  SLLAAALLGP  ALWLTPVAQA  ETDPTETVTV  YHEAFAGGQG  AATPSGGASL60
TAVTGKAFDG  NADGAALYVS  NRVNNWDAVD  FRFADLGLQN  GKTYTVTLTG  YVDAGVTVPA120
GAQTWLQTVN  GYGWLAGADF  AAGSAFTMTK  EFTVDTSKDS  ALRVQSNDAG  AGVPFYIGDI180
LITEKTASGG  GGSNDRPPAL  PFNTITFEDQ  TAGGFAGRAG  TETLTVTNEA  NHTAGGSYSL240
KVENRTAAWH  GPSLRIEKYV  DLGFEYTLSV  WVKLLSPDSS  QLQLSTQIGD  GSSASYNNVL300
GKTITTADGW  VLYQGTYRYN  NAGGEYLTLY  VESSNNGTAS  YYIDDVSLVR  GSGPIGIQKD360
LIPIKDAYQN  DFLIGNAVSS  ADLDGVRLEL  LKMHHNAVTA  ENTMKPDSLQ  PTKGDFTFDG420
ADAIVDKARA  EGLNVHGHVL  VWHQQTPAWM  NTAQDAQNNT  VPLGRDEALG  NMRTHIRTVM480
EHFGSKVISW  DVVNEAMNDN  PANPSDWQSA  LRRSPWYQAV  GPDYVEQAFL  AAREVLNDHP540
DWDIKLYYND  YNDDNQNKAQ  AIYSMVKALN  DKYAETHPGK  KLIDGIGMQG  HYNINTNPDN600
VKLSLEKFIS  LGVEVSVSEL  DVQAGSNGQL  TEKQAVAQGY  LYAQLFKLYK  AHADHIARVT660
FWGLNDATSW  RAESSPLPFD  KNLQAKPAYY  GILDPDKFIA  EHPPESTQAN  QATAGFATPV720
VDGTVDAVWS  RTPEMPINRY  QTAWQGAAGT  AKALWDNQNL  YVLIQVSDAQ  LDKGSLNPWE780
QDSVEIFVDQ  NNAKTSFYQD  DDGQYRVNFD  NETSFNPPAL  ADGFVSATHV  NGMNYTVEVK840
IPLKSVTPAN  GLKLGFDVQI  NDAKDGARQS  VAAWNDTTGT  GYMDTSVYGE  LTLKAPPAAP900
TDLTLTAASS  TSIALDWSYA  SGAPVTFSVF  RATAADGPFT  EAAANLNDSA  FTDTNLQPDT960
KYYYYVKASD  GTTVSQPSLT  VSGRTLLAPV  GHLAAAALNH  QVIRLDWDRI  QPAAAYAVYR1020
STAADGPYTK  IADRLSASQY  VDNQLEPSTI  YYYKVVAIAG  NNRSEAASAQ  AATPAKPGKP1080
QR1082

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help