Information for CAZyme ID: AXT20356.1
Basic Information
GenBank ID | AXT20356.1 |
Family | GH5_42 |
Sequence Length | 504 |
UniProt ID | A0A3A9VH71(100,100)![]() |
Average pLDDT? | 92.74 |
CAZy50 ID | 65871 |
CAZy50 Rep | No, QKX03962.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1871037 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Flavobacteriaceae |
Genus | |
Species | Flavobacteriaceae bacterium |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MVNINKIILR GVLLLSYVAI IALIIFGISA LFSYLNTGAD RSTILHTEVK RIDQYLPKIN | 60 |
WEPLNNEGRQ IDSQTLSTIE KDYLNALYVK HIAYKSNLTT GLDDYYTESA RENLYNLITT | 120 |
NHSQNISIEA TTLEHHPTLE FFSEDGQLAV ITDKDVIEYK RIYKNETLVL ETTESATYKI | 180 |
ILLLEDGFWR IRHIVVQDVS EHHYKINPVS VDKLNIKGIN YYPQETPWDM FGHHFDAKVI | 240 |
SKDFKIIKDA GLNTIRIFIP YEDFGKANVS SEKLEKLQQV LDLAVINNIK IVVTLFDFYG | 300 |
DYSVLNWTLN QRHVEAIITK FKDHQAIIAW DIKNEPDLDF ESRNKSNVIA WLRNMTAFIK | 360 |
TIDQDHPITI GWSNAKNASL LKDDLDYVSF HYYEDIDDLE TTFKSLKQII VDKPIIISEF | 420 |
GISSYKGFWK PFGSSKKKQA NYHEKAQDIF SKNNIQFMSW TLYDYQKIPK EVVGKLPWRK | 480 |
NTQKRFGFID ENGAKKEAFQ FISN | 504 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.74 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH5_42(216-469)
MVNINKIILR GVLLLSYVAI IALIIFGISA LFSYLNTGAD RSTILHTEVK RIDQYLPKIN | 60 |
WEPLNNEGRQ IDSQTLSTIE KDYLNALYVK HIAYKSNLTT GLDDYYTESA RENLYNLITT | 120 |
NHSQNISIEA TTLEHHPTLE FFSEDGQLAV ITDKDVIEYK RIYKNETLVL ETTESATYKI | 180 |
ILLLEDGFWR IRHIVVQDVS EHHYKINPVS VDKLNIKGIN YYPQETPWDM FGHHFDAKVI | 240 |
SKDFKIIKDA GLNTIRIFIP YEDFGKANVS SEKLEKLQQV LDLAVINNIK IVVTLFDFYG | 300 |
DYSVLNWTLN QRHVEAIITK FKDHQAIIAW DIKNEPDLDF ESRNKSNVIA WLRNMTAFIK | 360 |
TIDQDHPITI GWSNAKNASL LKDDLDYVSF HYYEDIDDLE TTFKSLKQII VDKPIIISEF | 420 |
GISSYKGFWK PFGSSKKKQA NYHEKAQDIF SKNNIQFMSW TLYDYQKIPK EVVGKLPWRK | 480 |
NTQKRFGFID ENGAKKEAFQ FISN | 504 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.