CAZyme3D

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Entry ID

Information for CAZyme ID: AXL87690.1

Basic Information

GenBank IDAXL87690.1
FamilyGH51
Sequence Length824
UniProt IDA0A346BX75(100,100)Download
Average pLDDT?93.66
CAZy50 ID2058
CAZy50 RepNo, WAC69898.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2083284
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. CB09001

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSRTRWRLGL  SVTALLTASA  LLPSPAHAEA  VADYTITVDP  SGRGPAIDDT  MYGVFYEDIN60
RAADGGLYAE  LVQNRSFEYS  TADNASYTPL  TAWAADGAAE  VVDDGGRLNE  RNRNYLSLAA120
GSTVANAGYN  TGIRVEKGAR  YDFSVWSRAE  QGTTLTVTLT  DAAGTLAKTR  QVAAKGQWRK180
YTATFTATRT  SNRGRLAVAT  TAPAALDMVS  FFPRDTYRHQ  PNGLRKDLAE  KIEALHPGFL240
RFPGGCLVNT  GSMADYSADS  GWQRKRSYQW  KDTVGPVEER  ATNANFWGYN  QSYGLGYYEY300
FRFAEDIGAM  PLPVVPALVT  GCGQNQAVDD  DTLLKRHIQD  TLDLIEFANG  PRTSEWGGKR360
AEMGHPKPFH  LTHLEVGNEE  NLPKEFFARF  EQFRAAIEAT  YPDITVVSNS  GPDDSGATFD420
TAWQLNRDAG  VAMVDEHYYN  SPQWFLQNND  RYDSYDRNGP  KVFLGEYASQ  GNAWKNALAE480
AAFMTGLERN  ADVVKLASYA  PLLSNEDYVQ  WSPDLIWFNN  HASWGSANYE  VQKLFMNNTG540
DRVVPSTATG  TPAVSGPITG  GVGLSTWATS  AAYDDVKVTS  AAGETLLSDD  FSGDASQWTH600
SGAGSWTVQD  GQYVQTDAAA  ENTLVTAGDP  AWHDYDLHVR  ATKKSGKEGF  LVAFGVKDTG660
NYYWWNLGGW  NNTQSAVEQA  SDGGKSTLLS  KAGSIETGRA  YDIDVKVRGR  QVTLYLDGEE720
WGGFIDDKPA  EPFRQTVTRD  DRTGELIVKV  VNAQDTAART  AVDLGGAKVA  SRAAVTTLAA780
GQDAVNTETD  TPVAPVTSTF  SGAASEFTYT  FPANSVTFLR  LRQR824

Predicted 3D structure by AlphaFold2 with pLDDT = 93.66 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM4(71-197)+GH51(174-823)

MSRTRWRLGL  SVTALLTASA  LLPSPAHAEA  VADYTITVDP  SGRGPAIDDT  MYGVFYEDIN60
RAADGGLYAE  LVQNRSFEYS  TADNASYTPL  TAWAADGAAE  VVDDGGRLNE  RNRNYLSLAA120
GSTVANAGYN  TGIRVEKGAR  YDFSVWSRAE  QGTTLTVTLT  DAAGTLAKTR  QVAAKGQWRK180
YTATFTATRT  SNRGRLAVAT  TAPAALDMVS  FFPRDTYRHQ  PNGLRKDLAE  KIEALHPGFL240
RFPGGCLVNT  GSMADYSADS  GWQRKRSYQW  KDTVGPVEER  ATNANFWGYN  QSYGLGYYEY300
FRFAEDIGAM  PLPVVPALVT  GCGQNQAVDD  DTLLKRHIQD  TLDLIEFANG  PRTSEWGGKR360
AEMGHPKPFH  LTHLEVGNEE  NLPKEFFARF  EQFRAAIEAT  YPDITVVSNS  GPDDSGATFD420
TAWQLNRDAG  VAMVDEHYYN  SPQWFLQNND  RYDSYDRNGP  KVFLGEYASQ  GNAWKNALAE480
AAFMTGLERN  ADVVKLASYA  PLLSNEDYVQ  WSPDLIWFNN  HASWGSANYE  VQKLFMNNTG540
DRVVPSTATG  TPAVSGPITG  GVGLSTWATS  AAYDDVKVTS  AAGETLLSDD  FSGDASQWTH600
SGAGSWTVQD  GQYVQTDAAA  ENTLVTAGDP  AWHDYDLHVR  ATKKSGKEGF  LVAFGVKDTG660
NYYWWNLGGW  NNTQSAVEQA  SDGGKSTLLS  KAGSIETGRA  YDIDVKVRGR  QVTLYLDGEE720
WGGFIDDKPA  EPFRQTVTRD  DRTGELIVKV  VNAQDTAART  AVDLGGAKVA  SRAAVTTLAA780
GQDAVNTETD  TPVAPVTSTF  SGAASEFTYT  FPANSVTFLR  LRQR824

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help