CAZyme3D

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Entry ID

Information for CAZyme ID: AXK41907.1

Basic Information

GenBank IDAXK41907.1
FamilyGT51
Sequence Length222
UniProt IDA0A345YDA5(100,100)Download
Average pLDDT?92.32
CAZy50 ID114403
CAZy50 RepNo, ABI75511.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2182384
KingdomBacteria
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusErythrobacter
SpeciesErythrobacter aureus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRWLVRFLFK  AVIGFIGLSL  LLVLLFRFVP  VPVTATMLMD  GNGITKDWTS  LSNIDRNMVR60
AAIAAEDGKF  CNHDGFDREA  IEKAIEDNAR  GGRIRGGSTI  SQQTAKNVFL  WQGGGYVRKG120
FEAWFTVLIE  QIWGKRRIME  VYLNVAETGI  GTYGVEAGAR  RYYGKSAASL  TPIEAARMAA180
ALPLPKERSV  TNPRGWLARH  GNTIAARIGS  VARDGLDSCV  YR222

Predicted 3D structure by AlphaFold2 with pLDDT = 92.32 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(45-194)

MRWLVRFLFK  AVIGFIGLSL  LLVLLFRFVP  VPVTATMLMD  GNGITKDWTS  LSNIDRNMVR60
AAIAAEDGKF  CNHDGFDREA  IEKAIEDNAR  GGRIRGGSTI  SQQTAKNVFL  WQGGGYVRKG120
FEAWFTVLIE  QIWGKRRIME  VYLNVAETGI  GTYGVEAGAR  RYYGKSAASL  TPIEAARMAA180
ALPLPKERSV  TNPRGWLARH  GNTIAARIGS  VARDGLDSCV  YR222

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help