CAZyme3D

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Entry ID

Information for CAZyme ID: AXJ02385.1

Basic Information

GenBank IDAXJ02385.1
FamilyGT2
Sequence Length236
UniProt IDA0A345UPI3(100,100)Download
Average pLDDT?96.02
CAZy50 ID172107
CAZy50 RepNo, QKG55837.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1457365
KingdomBacteria
PhylumBalneolota
ClassBalneolia
OrderBalneolales
FamilyCyclonatronaceae
GenusCyclonatronum
SpeciesCyclonatronum proteinivorum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSKAFVSVII  PVYREAGHIG  RLVHFLKPQL  EQDGRAECLV  VDAQSDDGTE  AEARAAGARV60
LQSPRKGRAA  QMNYGASKSR  GTILFFLHAD  SYPPEGFLDD  IRARVKEGAE  SGCYRLAFDE120
PLAVMRLYAW  FTRFDVLPFR  FGDQGLFVQR  PVFEVEGGFD  ESLVVMEDNV  FIRQLRRRKR180
FVIIPRQLTT  SARKYRENGF  VRLQLIFAAI  FVLHYAGLSQ  EALVQFYRDV  VRQNKI236

Predicted 3D structure by AlphaFold2 with pLDDT = 96.02 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(7-129)

MSKAFVSVII  PVYREAGHIG  RLVHFLKPQL  EQDGRAECLV  VDAQSDDGTE  AEARAAGARV60
LQSPRKGRAA  QMNYGASKSR  GTILFFLHAD  SYPPEGFLDD  IRARVKEGAE  SGCYRLAFDE120
PLAVMRLYAW  FTRFDVLPFR  FGDQGLFVQR  PVFEVEGGFD  ESLVVMEDNV  FIRQLRRRKR180
FVIIPRQLTT  SARKYRENGF  VRLQLIFAAI  FVLHYAGLSQ  EALVQFYRDV  VRQNKI236

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help