CAZyme3D

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Entry ID

Information for CAZyme ID: AXH91664.1

Basic Information

GenBank IDAXH91664.1
FamilyCBM13, GH18
Sequence Length456
UniProt IDA0A6N3K557(100,100)Download
Average pLDDT?89.72
CAZy50 ID74033
CAZy50 RepNo, UWP80037.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID47850
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora aurantiaca

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPRPHLRRRL  AAGALALATT  AAMLTLAPTA  AEAVVLPNNF  KSVGYMPSWS  GNVNTIQYGK60
LTHINYAFVL  PNGDGSLRPV  ENPGKLSSLV  SLGHASNVKV  SIAVGGWNDG  DDSAFEALAA120
NSGTRTAFVN  NLIAFVNQYN  LDGVDMDWEY  PDPGASANNY  TLLMQQLGSA  LHSRGKLLTA180
AVVSEGYYVD  GVPTAVFGSV  DWLNIMAYDG  GSPHAGYDWS  IASVNRWKSR  GLPAAKAVLG240
VPFYSRPGYY  TYSALVGMDP  ANANRDCTTA  GGAQQCYNGV  PTVKRKTQWA  LANAGGMMNW300
ELSQDTTGST  SLVSAIYDTV  TGGGTPPSGR  TGPITGIGGA  CVDVAAASSA  NGTAIQLYGC360
NGTAAQSWTV  AGDGTLRALG  KCLDVTSAGT  ANGTRIQLWD  CNGTGAQTWQ  AQSNGTLRNP420
ASGRCLDATG  NSSANGTRLQ  IWDCFGGANQ  VWRLPA456

Predicted 3D structure by AlphaFold2 with pLDDT = 89.72 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(41-312)+CBM13(338-453)

MPRPHLRRRL  AAGALALATT  AAMLTLAPTA  AEAVVLPNNF  KSVGYMPSWS  GNVNTIQYGK60
LTHINYAFVL  PNGDGSLRPV  ENPGKLSSLV  SLGHASNVKV  SIAVGGWNDG  DDSAFEALAA120
NSGTRTAFVN  NLIAFVNQYN  LDGVDMDWEY  PDPGASANNY  TLLMQQLGSA  LHSRGKLLTA180
AVVSEGYYVD  GVPTAVFGSV  DWLNIMAYDG  GSPHAGYDWS  IASVNRWKSR  GLPAAKAVLG240
VPFYSRPGYY  TYSALVGMDP  ANANRDCTTA  GGAQQCYNGV  PTVKRKTQWA  LANAGGMMNW300
ELSQDTTGST  SLVSAIYDTV  TGGGTPPSGR  TGPITGIGGA  CVDVAAASSA  NGTAIQLYGC360
NGTAAQSWTV  AGDGTLRALG  KCLDVTSAGT  ANGTRIQLWD  CNGTGAQTWQ  AQSNGTLRNP420
ASGRCLDATG  NSSANGTRLQ  IWDCFGGANQ  VWRLPA456

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help